RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 MPDU1O75352 247 aa13.57□□□□□ -0.24
ITGA4-202ENST00000339307 M6PRP20645 277 aa13.57□□□□□ -0.24
ITGA4-202ENST00000339307 FGF7P21781 194 aa13.57□□□□□ -0.24
ITGA4-202ENST00000339307 NHLH2Q02577 135 aa13.57□□□□□ -0.24
ITGA4-202ENST00000339307 OR5C1Q8NGR4 320 aa13.57□□□□□ -0.24
ITGA4-202ENST00000339307 AQP10Q96PS8 301 aa13.57□□□□□ -0.24
ITGA4-202ENST00000339307 TIMM9Q9Y5J7 89 aa13.57□□□□□ -0.24
ITGA4-202ENST00000339307 RPL29P47914 159 aaKnown RBP13.56□□□□□ -0.24
ITGA4-202ENST00000339307 ERCC8Q13216 396 aa13.56□□□□□ -0.24
ITGA4-202ENST00000339307 INO80EQ8NBZ0 244 aaPredicted RBP13.56□□□□□ -0.24
ITGA4-202ENST00000339307 BLNKQ8WV28 456 aa13.56□□□□□ -0.24
ITGA4-202ENST00000339307 NPIPB6E9PJ23 425 aa13.56□□□□□ -0.24
ITGA4-202ENST00000339307 Q9H8V8 135 aa13.56□□□□□ -0.24
ITGA4-202ENST00000339307 PKHD1P08F94 4074 aa13.56□□□□□ -0.24
ITGA4-202ENST00000339307 C16orf90A8MZG2 172 aa13.55□□□□□ -0.24
ITGA4-202ENST00000339307 M0R3E3 92 aa13.55□□□□□ -0.24
ITGA4-202ENST00000339307 Q5BKY6 102 aa13.55□□□□□ -0.24
ITGA4-202ENST00000339307 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
ITGA4-202ENST00000339307 TRBV19A0A075B6N1 114 aa13.54□□□□□ -0.24
ITGA4-202ENST00000339307 PYYP10082 97 aa13.54□□□□□ -0.24
ITGA4-202ENST00000339307 HOXA5P20719 270 aa13.54□□□□□ -0.24
ITGA4-202ENST00000339307 RXFP4Q8TDU9 374 aa13.54□□□□□ -0.24
ITGA4-202ENST00000339307 ODF3Q96PU9 254 aa13.54□□□□□ -0.24
ITGA4-202ENST00000339307 ATP5SQ99766 215 aa13.54□□□□□ -0.24
ITGA4-202ENST00000339307 TNFSF18Q9UNG2 199 aa13.54□□□□□ -0.24
ITGA4-202ENST00000339307 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
ITGA4-202ENST00000339307 G3V3Q6 166 aa13.53□□□□□ -0.24
ITGA4-202ENST00000339307 Q6ZTI0 123 aa13.53□□□□□ -0.24
ITGA4-202ENST00000339307 EXOC3-AS1Q8N2X6 119 aa13.53□□□□□ -0.24
ITGA4-202ENST00000339307 TMPRSS5Q9H3S3 457 aa13.53□□□□□ -0.24
ITGA4-202ENST00000339307 AAMDCQ9H7C9 122 aa13.53□□□□□ -0.24
ITGA4-202ENST00000339307 GSN-AS1Q9NRJ2 163 aa13.53□□□□□ -0.24
ITGA4-202ENST00000339307 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
ITGA4-202ENST00000339307 C7orf71A4D174 169 aa13.52□□□□□ -0.25
ITGA4-202ENST00000339307 ZNF253O75346 499 aa13.52□□□□□ -0.25
ITGA4-202ENST00000339307 SLC25A5P05141 298 aaKnown RBP13.52□□□□□ -0.25
ITGA4-202ENST00000339307 HIST1H1EP10412 219 aaKnown RBP13.52□□□□□ -0.25
ITGA4-202ENST00000339307 RNASE4P34096 147 aaKnown RBP13.52□□□□□ -0.25
ITGA4-202ENST00000339307 LINC00612Q8N6U2 182 aa13.52□□□□□ -0.25
ITGA4-202ENST00000339307 KCNIP2Q9NS61 270 aa13.52□□□□□ -0.25
ITGA4-202ENST00000339307 PKD1P98161 4303 aa13.52□□□□□ -0.25
ITGA4-202ENST00000339307 HMSDA8MTL9 139 aa13.51□□□□□ -0.25
ITGA4-202ENST00000339307 IFNA5P01569 189 aa13.51□□□□□ -0.25
ITGA4-202ENST00000339307 ZNF266Q14584 549 aa13.51□□□□□ -0.25
ITGA4-202ENST00000339307 GCSAMLQ5JQS6 135 aa13.51□□□□□ -0.25
ITGA4-202ENST00000339307 TCTE3Q8IZS6 198 aa13.51□□□□□ -0.25
ITGA4-202ENST00000339307 MRPL53Q96EL3 112 aaKnown RBP13.51□□□□□ -0.25
ITGA4-202ENST00000339307 TMEM14CQ9P0S9 112 aa13.51□□□□□ -0.25
ITGA4-202ENST00000339307 PRELID1Q9Y255 219 aa13.51□□□□□ -0.25
ITGA4-202ENST00000339307 TRGV1A0A0A0MS02 117 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 NDUFB4O95168 129 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 GPX1P07203 203 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 BTN1A1Q13410 526 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 ICAM4Q14773 271 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 ESRGQ1W209 222 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 FAM122CQ6P4D5 195 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 ST6GAL2Q96JF0 529 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 LINC00477Q96M19 166 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 NPCDR1Q9BY65 106 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 WDR61Q9GZS3 305 aaKnown RBP13.5□□□□□ -0.25
ITGA4-202ENST00000339307 MUC4Q99102 2169 aa13.5□□□□□ -0.25
ITGA4-202ENST00000339307 RNF222A6NCQ9 220 aa13.49□□□□□ -0.25
ITGA4-202ENST00000339307 CD300CQ08708 224 aa13.49□□□□□ -0.25
ITGA4-202ENST00000339307 DAZ2Q13117 558 aaKnown RBP13.49□□□□□ -0.25
ITGA4-202ENST00000339307 ZNF680Q8NEM1 530 aa13.49□□□□□ -0.25
ITGA4-202ENST00000339307 ZNF503Q96F45 646 aa13.49□□□□□ -0.25
ITGA4-202ENST00000339307 AGPAT4-IT1Q9H0P7 198 aa13.49□□□□□ -0.25
ITGA4-202ENST00000339307 C17orf112F2Z3M2 114 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 TAAR5O14804 337 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 PDE6HQ13956 83 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 ZNF345Q14585 488 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 TTC32Q5I0X7 151 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 TMEM78Q5T7P6 136 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 AKAP14Q86UN6 197 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 EIF4E3Q8N5X7 224 aaKnown RBP13.48□□□□□ -0.25
ITGA4-202ENST00000339307 SCGB1C1Q8TD33 95 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 SLC25A2Q9BXI2 301 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 DYNC1H1Q14204 4646 aaKnown RBP13.48□□□□□ -0.25
ITGA4-202ENST00000339307 DNAH11Q96DT5 4516 aa13.48□□□□□ -0.25
ITGA4-202ENST00000339307 IGKV2-40A0A087WW87 121 aaPredicted RBP13.47□□□□□ -0.25
ITGA4-202ENST00000339307 RGS13O14921 159 aa13.47□□□□□ -0.25
ITGA4-202ENST00000339307 IGKV2D-40P01614 121 aaPredicted RBP13.47□□□□□ -0.25
ITGA4-202ENST00000339307 MIR17HGQ75NE6 70 aa13.47□□□□□ -0.25
ITGA4-202ENST00000339307 FUT9Q9Y231 359 aa13.47□□□□□ -0.25
ITGA4-202ENST00000339307 hCG_2014768A0A024R1R8 64 aa13.47□□□□□ -0.25
ITGA4-202ENST00000339307 SMIM3Q9BZL3 60 aa13.47□□□□□ -0.25
ITGA4-202ENST00000339307 OR51M1Q9H341 326 aa13.47□□□□□ -0.25
ITGA4-202ENST00000339307 KLF12Q9Y4X4 402 aa13.47□□□□□ -0.25
ITGA4-202ENST00000339307 A0A0D9SG52 128 aa13.46□□□□□ -0.26
ITGA4-202ENST00000339307 KLLNB2CW77 178 aa13.46□□□□□ -0.26
ITGA4-202ENST00000339307 H3BNG1 76 aa13.46□□□□□ -0.26
ITGA4-202ENST00000339307 ARPC5O15511 151 aa13.46□□□□□ -0.26
ITGA4-202ENST00000339307 ZNF324O75467 553 aaPredicted RBP13.46□□□□□ -0.26
ITGA4-202ENST00000339307 OR10J4P0C629 311 aa13.46□□□□□ -0.26
ITGA4-202ENST00000339307 NBEAP1P0C6P0 100 aa13.46□□□□□ -0.26
ITGA4-202ENST00000339307 SPATA12Q7Z6I5 190 aa13.46□□□□□ -0.26
ITGA4-202ENST00000339307 VGLL1Q99990 258 aa13.46□□□□□ -0.26
ITGA4-202ENST00000339307 SMLR1H3BR10 107 aa13.45□□□□□ -0.26
ITGA4-202ENST00000339307 IGHV3-53P01767 116 aa13.45□□□□□ -0.26
ITGA4-202ENST00000339307 C9orf47Q6ZRZ4 202 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms