RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 H3BNG1 76 aa10.81□□□□□ -0.68
LINC01116-202ENST00000339037 H3BQ15 152 aa10.81□□□□□ -0.68
LINC01116-202ENST00000339037 PVALBP20472 110 aaPredicted RBP10.81□□□□□ -0.68
LINC01116-202ENST00000339037 ESRGQ1W209 222 aa10.81□□□□□ -0.68
LINC01116-202ENST00000339037 VWC2Q2TAL6 325 aa10.81□□□□□ -0.68
LINC01116-202ENST00000339037 MRPS16Q9Y3D3 137 aaKnown RBP10.81□□□□□ -0.68
LINC01116-202ENST00000339037 FAT1Q14517 4588 aa10.8□□□□□ -0.68
LINC01116-202ENST00000339037 SULT1A1P50225 295 aa10.8□□□□□ -0.68
LINC01116-202ENST00000339037 RAB31Q13636 194 aa10.8□□□□□ -0.68
LINC01116-202ENST00000339037 Q6ZRG5 221 aa10.8□□□□□ -0.68
LINC01116-202ENST00000339037 TMEM252Q8N6L7 170 aa10.8□□□□□ -0.68
LINC01116-202ENST00000339037 SAT2Q96F10 170 aaPredicted RBP10.8□□□□□ -0.68
LINC01116-202ENST00000339037 DNAJC4Q9NNZ3 241 aa10.8□□□□□ -0.68
LINC01116-202ENST00000339037 BAXQ07812 192 aa10.79□□□□□ -0.68
LINC01116-202ENST00000339037 ASAH1Q13510 395 aa10.79□□□□□ -0.68
LINC01116-202ENST00000339037 TMPRSS5Q9H3S3 457 aa10.79□□□□□ -0.68
LINC01116-202ENST00000339037 ZNF586Q9NXT0 402 aa10.79□□□□□ -0.68
LINC01116-202ENST00000339037 PXMP4Q9Y6I8 212 aa10.79□□□□□ -0.68
LINC01116-202ENST00000339037 J3KRW8 73 aa10.78□□□□□ -0.68
LINC01116-202ENST00000339037 S100A11P31949 105 aa10.78□□□□□ -0.68
LINC01116-202ENST00000339037 RPL29P47914 159 aaKnown RBP10.78□□□□□ -0.68
LINC01116-202ENST00000339037 MZT2BQ6NZ67 158 aa10.78□□□□□ -0.68
LINC01116-202ENST00000339037 LINC00299Q6ZSB3 139 aa10.78□□□□□ -0.68
LINC01116-202ENST00000339037 STX12Q86Y82 276 aa10.78□□□□□ -0.68
LINC01116-202ENST00000339037 OR1L4Q8NGR5 311 aa10.78□□□□□ -0.68
LINC01116-202ENST00000339037 PFDN5Q99471 154 aa10.78□□□□□ -0.68
LINC01116-202ENST00000339037 SLC39A9Q9NUM3 307 aa10.78□□□□□ -0.68
LINC01116-202ENST00000339037 TRAV12-3A0A0B4J271 114 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 FGF7P21781 194 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 LEPP41159 167 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 HBG1P69891 147 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 HBG2P69892 147 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
LINC01116-202ENST00000339037 Q6ZTI0 123 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 S100ZQ8WXG8 99 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 ODF3Q96PU9 254 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 PYGO2Q9BRQ0 406 aa10.77□□□□□ -0.69
LINC01116-202ENST00000339037 GPN1Q9HCN4 374 aaPredicted RBP10.77□□□□□ -0.69
LINC01116-202ENST00000339037 SIX6O95475 246 aa10.76□□□□□ -0.69
LINC01116-202ENST00000339037 CT45A10P0DMU9 189 aa10.76□□□□□ -0.69
LINC01116-202ENST00000339037 LINC00315P59091 139 aa10.76□□□□□ -0.69
LINC01116-202ENST00000339037 GUK1Q16774 197 aa10.76□□□□□ -0.69
LINC01116-202ENST00000339037 MYCBP2O75592 4640 aa10.76□□□□□ -0.69
LINC01116-202ENST00000339037 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 A0A096LPF7 62 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 NPIPB6E9PJ23 425 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 IFITM3Q01628 133 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 NHLH2Q02577 135 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 ENKURQ8TC29 256 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 CHAC2Q8WUX2 184 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 VSIG2Q96IQ7 327 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 NPCDR1Q9BY65 106 aa10.75□□□□□ -0.69
LINC01116-202ENST00000339037 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
LINC01116-202ENST00000339037 EPM2AB3EWF7 344 aa10.74□□□□□ -0.69
LINC01116-202ENST00000339037 M0R3E3 92 aa10.74□□□□□ -0.69
LINC01116-202ENST00000339037 UPK1BO75841 260 aa10.74□□□□□ -0.69
LINC01116-202ENST00000339037 PYYP10082 97 aa10.74□□□□□ -0.69
LINC01116-202ENST00000339037 ATP6V1FQ16864 119 aa10.74□□□□□ -0.69
LINC01116-202ENST00000339037 ZNF680Q8NEM1 530 aa10.74□□□□□ -0.69
LINC01116-202ENST00000339037 OR5AC2Q9NZP5 309 aa10.74□□□□□ -0.69
LINC01116-202ENST00000339037 SRRM2Q9UQ35 2752 aaKnown RBP10.73□□□□□ -0.69
LINC01116-202ENST00000339037 ZNF253O75346 499 aa10.73□□□□□ -0.69
LINC01116-202ENST00000339037 NDUFB4O95168 129 aa10.73□□□□□ -0.69
LINC01116-202ENST00000339037 Q6ZRN7 208 aaPredicted RBP10.73□□□□□ -0.69
LINC01116-202ENST00000339037 OR5C1Q8NGR4 320 aa10.73□□□□□ -0.69
LINC01116-202ENST00000339037 THAP6Q8TBB0 222 aa10.73□□□□□ -0.69
LINC01116-202ENST00000339037 C18orf15Q96N68 181 aa10.73□□□□□ -0.69
LINC01116-202ENST00000339037 GSN-AS1Q9NRJ2 163 aa10.73□□□□□ -0.69
LINC01116-202ENST00000339037 PTTG2Q9NZH5 202 aa10.73□□□□□ -0.69
LINC01116-202ENST00000339037 TMEM14CQ9P0S9 112 aa10.73□□□□□ -0.69
LINC01116-202ENST00000339037 TRGV1A0A0A0MS02 117 aa10.72□□□□□ -0.69
LINC01116-202ENST00000339037 H0YIZ8 118 aa10.72□□□□□ -0.69
LINC01116-202ENST00000339037 SIVA1O15304 175 aa10.72□□□□□ -0.69
LINC01116-202ENST00000339037 MPDU1O75352 247 aa10.72□□□□□ -0.69
LINC01116-202ENST00000339037 SLC25A5P05141 298 aaKnown RBP10.72□□□□□ -0.69
LINC01116-202ENST00000339037 LRRC37A5PQ49AS3 106 aa10.72□□□□□ -0.69
LINC01116-202ENST00000339037 C11orf72Q8NBR9 251 aa10.72□□□□□ -0.69
LINC01116-202ENST00000339037 FUT9Q9Y231 359 aa10.72□□□□□ -0.69
LINC01116-202ENST00000339037 hCG_2014768A0A024R1R8 64 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 C7orf71A4D174 169 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 HIST1H1EP10412 219 aaKnown RBP10.71□□□□□ -0.69
LINC01116-202ENST00000339037 ERVFC1-1P60608 527 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 ERCC8Q13216 396 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 EXOC3-AS1Q8N2X6 119 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 BLNKQ8WV28 456 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 MRPL53Q96EL3 112 aaKnown RBP10.71□□□□□ -0.69
LINC01116-202ENST00000339037 SLC25A2Q9BXI2 301 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 NMES1Q9C002 83 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 CDIP1Q9H305 208 aa10.71□□□□□ -0.69
LINC01116-202ENST00000339037 VPS13BQ7Z7G8 4022 aa10.71□□□□□ -0.7
LINC01116-202ENST00000339037 E5RGE8 158 aa10.7□□□□□ -0.7
LINC01116-202ENST00000339037 NXPH4O95158 308 aa10.7□□□□□ -0.7
LINC01116-202ENST00000339037 PDE6HQ13956 83 aa10.7□□□□□ -0.7
LINC01116-202ENST00000339037 MIR17HGQ75NE6 70 aa10.7□□□□□ -0.7
LINC01116-202ENST00000339037 FAM167A-AS1Q96KT0 104 aa10.7□□□□□ -0.7
LINC01116-202ENST00000339037 SLC25A31Q9H0C2 315 aa10.7□□□□□ -0.7
LINC01116-202ENST00000339037 TIMM9Q9Y5J7 89 aa10.7□□□□□ -0.7
LINC01116-202ENST00000339037 KLLNB2CW77 178 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 INMT-MINDY4F8WBC2 141 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms