RNA–Protein interactions for RNA: ENST00000338957.4

ZC3H12B-201, Transcript of zinc finger CCCH-type containing 12B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H12B, Length 7,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12B-201ENST00000338957 SHROOM3Q8TF72 1996 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 SHANK3Q9BYB0 1731 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 XCL1P47992 114 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 SMPXQ9UHP9 88 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 AMBPP02760 352 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 CXCL1P09341 107 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 ARTNQ5T4W7 220 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 PRSS57Q6UWY2 283 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 USMG5Q96IX5 58 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 ZNF492Q9P255 531 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 ZFC3H1O60293 1989 aaKnown RBP4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 C9orf118A6NHY6 69 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 CRYGSP22914 178 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 MP68P56378 58 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 NUP35Q8NFH5 326 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 MRPS18CQ9Y3D5 142 aaKnown RBP4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 DOCK6Q96HP0 2047 aa4.28□□□□□ -1.72
ZC3H12B-201ENST00000338957 IGLV10-54A0A075B6I4 117 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 DEFB4AO15263 64 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 FGF6P10767 208 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 ZNF664Q8N3J9 261 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 NRGNQ92686 78 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 PIKFYVEQ9Y2I7 2098 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 M0R1W7 72 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 NTF4P34130 210 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 MRPL27Q9P0M9 148 aaKnown RBP4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 TRBV6-6A0A0A6YYG2 114 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 PYY3Q5JQD4 70 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 FANCMQ8IYD8 2048 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 TUBGCP6Q96RT7 1819 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGLV3-12A0A075B6K2 115 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGHV1-69DA0A0B4J2H0 117 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGHV1-69P01742 117 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 APOC4P55056 127 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 C3orf22Q8N5N4 141 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 NOP10Q9NPE3 64 aaKnown RBP4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 NUP214P35658 2090 aaPredicted RBP4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 A0A087WW49 117 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 ATOX1O00244 68 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 TEX36Q5VZQ5 186 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 HLA-DRB4P13762 266 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 APRG1Q8IVJ8 170 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 CARD19Q96LW7 228 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 HLA-DRB4X5D2U9 266 aa4.27□□□□□ -1.73
ZC3H12B-201ENST00000338957 SCN3AQ9NY46 2000 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 TRPT1Q86TN4 253 aaKnown RBP4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 FLVCR1-AS1Q8TAF5 88 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 POLR2AP24928 1970 aaKnown RBP4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 NDUFS7O75251 213 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGLV3-19P01714 112 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 Q86TA4 180 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 HS3ST6Q96QI5 342 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 LOXL1Q08397 574 aaPredicted RBP4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 PCNX2A6NKB5 2137 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 ATG2BQ96BY7 2078 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 TRGV9Q99603 122 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 TAF1P21675 1872 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 SCN4AP35499 1836 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 LRCOL1A6NCL2 159 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 CXCL5P42830 114 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 CKAP5Q14008 2032 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGHV2-70P01814 119 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGHV2-5P01817 119 aa4.26□□□□□ -1.73
ZC3H12B-201ENST00000338957 F8W735 103 aaPredicted RBP4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 Q0VG73 95 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 RMI2Q96E14 147 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 COL4A5P29400 1685 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 ADCYAP1P18509 176 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 DIAPH2-AS1Q14236 149 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 PIFOQ8TCI5 191 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 QSER1Q2KHR3 1735 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 TRBV19A0A075B6N1 114 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 K7EP34 96 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 C2orf66Q6UXQ4 117 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 TPSG1Q9NRR2 321 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 OOSP1A8MZH6 123 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 C3orf79P0CE67 100 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 TIRAPP58753 221 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 TMEM14EPQ6UXP3 125 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 C10orf105Q8TEF2 133 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 A0A0G2JRQ6 117 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 TEX48A0A1B0GUV7 120 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 SDHAF1A6NFY7 115 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 I3L3M4 83 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGHV4-59P01825 116 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 GRNP28799 593 aaKnown RBP4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 NDUFV3P56181 108 aaKnown RBP4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 NMSQ5H8A3 153 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 RNF152Q8N8N0 203 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 NTN5Q8WTR8 489 aaPredicted RBP4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 SHANK2-AS3Q9BTD1 123 aa4.25□□□□□ -1.73
ZC3H12B-201ENST00000338957 A0A1B0GUS0 222 aa4.24□□□□□ -1.73
ZC3H12B-201ENST00000338957 A0A1W2PPM0 123 aa4.24□□□□□ -1.73
ZC3H12B-201ENST00000338957 M0QXV9 152 aa4.24□□□□□ -1.73
ZC3H12B-201ENST00000338957 C8orf86Q6ZUL3 223 aa4.24□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.24□□□□□ -1.73
ZC3H12B-201ENST00000338957 IGKV2-29A2NJV5 120 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms