RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CFHR1Q03591 330 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 IDI2-AS1Q9NZ38 188 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 B9D1Q9UPM9 204 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 IGHV5-51A0A0C4DH38 117 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 TCF19Q9Y242 345 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 C20orf197Q8N268 126 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 C9orf85Q96MD7 179 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 RREB1Q92766 1687 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 CXCL1P09341 107 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 RFPL3SP0C7P2 107 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 RNF5Q99942 180 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 RPL36A-HNRNPH2H7BZ11 118 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 SH2D1AO60880 128 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 LIM2P55344 173 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 SLC25A47Q6Q0C1 308 aa4.95□□□□□ -1.62
CDC42BPA-201ENST00000334218 H0YIG0 161 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 FAM208BQ5VWN6 2430 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 COL5A3P25940 1745 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 C1orf105O95561 183 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 PATE1Q8WXA2 126 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 SMIM14Q96QK8 99 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 CTGFP29279 349 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 SPG11Q96JI7 2443 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 LIME1Q9H400 295 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 TOMM7Q9P0U1 55 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 TP53TG1Q9Y2A0 90 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 ADARB2-AS1A8MUL3 147 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 ZNF708P17019 499 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 Q6ZVL8 140 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 SHISA4Q96DD7 197 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 BCE1O60756 84 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 COL24A1Q17RW2 1714 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 IGLL5B9A064 214 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 RASL10BQ96S79 203 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 ICOSQ9Y6W8 199 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 ABCA2Q9BZC7 2435 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 ADAMTS9Q9P2N4 1935 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 CMC4P56277 68 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 FOXF2Q12947 444 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 LAIR2Q6ISS4 152 aa4.94□□□□□ -1.62
CDC42BPA-201ENST00000334218 TNS1Q9HBL0 1735 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 TMEM178BH3BS89 294 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 FAM222AQ5U5X8 452 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 CFHR4Q92496 578 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 DKK2Q9UBU2 259 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 PDCD1Q15116 288 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 C8orf82Q6P1X6 216 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 GPR179Q6PRD1 2367 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 IGF2-ASQ6U949 168 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 CLEC7AQ9BXN2 247 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 hDV103S1A0JD37 113 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 SPAG11BQ08648 103 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 SPAG11AQ6PDA7 123 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 HMGN4O00479 90 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 DEFB119Q8N690 84 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 TEX37Q96LM6 180 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 DPH3P1Q9H4G8 78 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 RFNGQ9Y644 331 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 SCO2A0A1W2PP80 73 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 H3BS24 57 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 K7ESM1 405 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 SHISA2Q6UWI4 295 aa4.93□□□□□ -1.62
CDC42BPA-201ENST00000334218 TRAV12-1A0A0B4J245 112 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 EBI3Q14213 229 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 VN1R4Q7Z5H5 301 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 SLC22A18ASQ8N1D0 253 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 C5orf66Q9H5L9 145 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 IGHV1-69DA0A0B4J2H0 117 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 SSC5DA1L4H1 1573 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 GNLYP22749 145 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 LPAL2Q16609 132 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 DEFB127Q9H1M4 99 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 FOLR3P41439 243 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 GNB2P62879 340 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 PPDPFQ9H3Y8 114 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 C1orf220Q5T0J3 134 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 SRSF7Q16629 238 aaKnown RBP eCLIP4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 UNQ6494/PRO21346Q6UXR6 183 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 TMEM14DPA8MWL7 114 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 TIRAPP58753 221 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 SS18Q15532 418 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 OSR1Q8TAX0 266 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 CXXC4Q9H2H0 198 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 SCRT2Q9NQ03 307 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 Q8N1Y9 231 aa4.92□□□□□ -1.62
CDC42BPA-201ENST00000334218 MST1P26927 711 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 LY6G6FQ5SQ64 297 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 C2orf66Q6UXQ4 117 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 ADAMTSL4Q6UY14 1074 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 BSPH1Q075Z2 132 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 OPRPNQ99935 248 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 ARRDC1-AS1Q9H2J1 176 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 CCL13Q99616 98 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 H0YJW9 148 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 WDR83OSQ9Y284 106 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 MIFP14174 115 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 PVRIGQ6DKI7 326 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 GFRALQ6UXV0 394 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 LINC00615Q96LM1 132 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 IL9P15248 144 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms