RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ANKRD11Q6UB99 2663 aaPredicted RBP6.22□□□□□ -1.41
VMA21-201ENST00000330374 HBDP02042 147 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 BOD1L2Q8IYS8 172 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 PTPRZ1P23471 2315 aaPredicted RBP6.22□□□□□ -1.41
VMA21-201ENST00000330374 IGKV2D-26A0A0A0MRZ7 120 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 PPIAL4CA0A0B4J2A2 164 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 LYNX1G3V0Z9 82 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 M0R296 226 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 RHODO00212 210 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 PPIAL4GP0DN37 164 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 LYNX1P0DP58 116 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 MRGPRG-AS1Q2M3A8 158 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 LCNL1Q6ZST4 164 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 GTSCR1Q86UQ5 136 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 PRSS33Q8NF86 280 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 NPFFR1Q9GZQ6 430 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 CTSZQ9UBR2 303 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 TRBV19A0A075B6N1 114 aa6.21□□□□□ -1.41
VMA21-201ENST00000330374 CDX4O14627 284 aaPredicted RBP6.21□□□□□ -1.41
VMA21-201ENST00000330374 APOBEC3AP31941 199 aaPredicted RBP6.21□□□□□ -1.41
VMA21-201ENST00000330374 PSG3Q16557 428 aa6.21□□□□□ -1.41
VMA21-201ENST00000330374 CRYGCP07315 174 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 SMIM13P0DJ93 91 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 GATA1P15976 413 aaPredicted RBP6.21□□□□□ -1.42
VMA21-201ENST00000330374 SAMD13Q5VXD3 122 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 SIGLEC9Q9Y336 463 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 ASH1LQ9NR48 2969 aaKnown RBP6.21□□□□□ -1.42
VMA21-201ENST00000330374 SH2D1AO60880 128 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 NDUFS7O75251 213 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 IGKV1-17P01599 117 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 ORM1P02763 201 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 FAM104BQ5XKR9 115 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 ADAMTSL5Q6ZMM2 481 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 PPP1R27Q86WC6 154 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 COL27A1Q8IZC6 1860 aaPredicted RBP6.21□□□□□ -1.42
VMA21-201ENST00000330374 OVOL3O00110 214 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 LINC00574Q9H8X3 128 aa6.21□□□□□ -1.42
VMA21-201ENST00000330374 C17orf100A8MU93 164 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 LEPP41159 167 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 FAM215AQ9Y5M1 114 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 PRRG2O14669 202 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 IGHV1-8P0DP01 117 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 LGALS7P47929 136 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 LGALS9BQ3B8N2 356 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 LGALS9CQ6DKI2 356 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 AMTNQ6UX39 209 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 FOXC2Q99958 501 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 DYNLRB1Q9NP97 96 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 RELNP78509 3460 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 LOXP28300 417 aaPredicted RBP6.2□□□□□ -1.42
VMA21-201ENST00000330374 TEX36Q5VZQ5 186 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 OR9G4Q8NGQ1 327 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 INS-IGF2F8WCM5 200 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 OR4X2Q8NGF9 303 aa6.2□□□□□ -1.42
VMA21-201ENST00000330374 AZU1P20160 251 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 BSPH1Q075Z2 132 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 RPEQ96AT9 228 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 SPAARA0A1B0GVQ0 90 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 TMEM178BH3BS89 294 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 HES1Q14469 280 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 SH2D6Q7Z4S9 175 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 EGR2P11161 476 aaPredicted RBP6.19□□□□□ -1.42
VMA21-201ENST00000330374 WFDC2Q14508 124 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 NEGR1Q7Z3B1 354 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 SHANK2-AS3Q9BTD1 123 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 CHAC1Q9BUX1 264 aa6.19□□□□□ -1.42
VMA21-201ENST00000330374 TSSC4Q9Y5U2 329 aaPredicted RBP6.19□□□□□ -1.42
VMA21-201ENST00000330374 IGHV3OR16-13A0A075B7E8 117 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 IGHV3-74A0A0B4J1X5 117 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 TIRAPP58753 221 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 TMEM30BQ3MIR4 351 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 DCHS2Q6V1P9 2916 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 IGHV1-3A0A0C4DH29 117 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 ZNF80P51504 273 aaPredicted RBP6.18□□□□□ -1.42
VMA21-201ENST00000330374 ZC2HC1BQ5TFG8 222 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 OR5A1Q8NGJ0 315 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 VGLL1Q99990 258 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 I3L2K1 104 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 ZNF491Q8N8L2 437 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 CUL9Q8IWT3 2517 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 IGHV3-66A0A0C4DH42 116 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 H3BMG7 143 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 ETDBQ3ZM63 59 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 ARPC1AQ92747 370 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 KLK15Q9H2R5 256 aa6.18□□□□□ -1.42
VMA21-201ENST00000330374 ZNF883P0CG24 379 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 TMEM14CQ9P0S9 112 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.17□□□□□ -1.42
VMA21-201ENST00000330374 ERCC8Q13216 396 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 TMEM158Q8WZ71 300 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 MAP1LC3AQ9H492 121 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 ONECUT1Q9UBC0 465 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 AKAP13Q12802 2813 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 ZFHX2Q9C0A1 2572 aaPredicted RBP6.17□□□□□ -1.42
VMA21-201ENST00000330374 TRAV26-2A0A0B4J265 109 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 TRAV40A0A0B4J280 105 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 H3BRN7 92 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 K7EIM0 57 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms