RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 SHANK2-AS3Q9BTD1 123 aa1.74□□□□□ -2.13
HIF1A-201ENST00000323441 GSN-AS1Q9NRJ2 163 aa1.74□□□□□ -2.13
HIF1A-201ENST00000323441 HSPB7Q9UBY9 170 aa1.74□□□□□ -2.13
HIF1A-201ENST00000323441 TMEM56-RWDD3S4R434 201 aa1.74□□□□□ -2.13
HIF1A-201ENST00000323441 TRAV4A0A0B4J268 109 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 PIGBOS1A0A0B4J2F0 54 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 IGHV3-30P01768 117 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 IGHV3-33P01772 117 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 IGHV3-30-3P0DP02 117 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 IGHV3-30-5P0DP03 117 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 UBE2NLQ5JXB2 153 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 LCN15Q6UWW0 184 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 LGI3Q8N145 548 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 EIF4E3Q8N5X7 224 aaKnown RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 RNF182Q8N6D2 247 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 BPIFCQ8NFQ6 507 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 OR5H6Q8NGV6 325 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 PCNPQ8WW12 178 aaKnown RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 RPUSD4Q96CM3 377 aaKnown RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 ZNF479Q96JC4 524 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 DNAJC30Q96LL9 226 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 SH3BGRL3Q9H299 93 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 ZNF331Q9NQX6 463 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 IGKV1OR2-108A0A075B7D4 117 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 CEBPZOSA8MTT3 80 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 GGTLC3B5MD39 225 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 PFN1P07737 140 aaKnown RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 HTN1P15515 57 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 CRISP2P16562 243 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 PRSS3P35030 304 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 TSPAN5P62079 268 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 PXDC1Q5TGL8 231 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 ARL6IP6Q8N6S5 226 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 CLRN3Q8NCR9 226 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 MRPL53Q96EL3 112 aaKnown RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 TMEM147Q9BVK8 224 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 GTSF1LQ9H1H1 148 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 TRGV1A0A0A0MS02 117 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 TRBV7-9A0A0J9YWB2 115 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 TEX13DA0A0J9YY54 714 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 LOC100131303A0A0U1RQF7 123 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 USP17L23D6RBM5 183 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 PRSS46E5RG02 174 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 KRTAP4-16G5E9R7 235 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 K7EPK0 472 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 CIDEAO60543 219 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 ZNF253O75346 499 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 SULT1A3P0DMM9 295 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 SULT1A4P0DMN0 295 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 CT45A10P0DMU9 189 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 CCR6P51684 374 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 POLR2GP62487 172 aaKnown RBP eCLIP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 SURF2Q15527 256 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 GUK1Q16774 197 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 TRIM16LQ309B1 348 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 DAZ4Q86SG3 579 aaKnown RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 DTD1Q8TEA8 209 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 GLYATL2Q8WU03 294 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 VCXQ9H320 206 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 SLC25A22Q9H936 323 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 DAZ3Q9NR90 486 aaKnown RBP1.73□□□□□ -2.13
HIF1A-201ENST00000323441 PXMP4Q9Y6I8 212 aa1.73□□□□□ -2.13
HIF1A-201ENST00000323441 IGHV3-64A0A075B6Q5 118 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 TRBV6-4A0A1B0GX49 114 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 MEIS3P1A6NDR6 274 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 SEC11BP0C7V7 166 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 GABARAPL2P60520 117 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 SELENOTP62341 195 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 RAB11AP62491 216 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 ENHOQ6UWT2 76 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 SELENOHQ8IZQ5 122 aaKnown RBP1.72□□□□□ -2.13
HIF1A-201ENST00000323441 PTH2Q96A98 100 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 C2orf50Q96LR7 162 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 LINC00479Q96M42 142 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 COPZ2Q9P299 210 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 BLOC1S6Q9UL45 172 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 SSR3Q9UNL2 185 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 C7orf71A4D174 169 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 FNDC10F2Z333 226 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 HLA-DMAP28067 261 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 SDC2P34741 201 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 RPP30P78346 268 aaKnown RBP1.72□□□□□ -2.13
HIF1A-201ENST00000323441 Q0VG73 95 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 FAM122CQ6P4D5 195 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 RNASE11Q8TAA1 199 aaKnown RBP1.72□□□□□ -2.13
HIF1A-201ENST00000323441 LHFPL5Q8TAF8 219 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 SPXQ9BT56 116 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 KRTAP9-3Q9BYQ3 159 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 HIGD1AQ9Y241 93 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 TRAV12-3A0A0B4J271 114 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 A0A0B4J2A0 478 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 TRGV4A0A0C4DH28 118 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 MUC21A0A0G2JKD1 596 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 DUXBA0A1W2PPF3 345 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 CRYM-AS1A6NIL9 109 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 H0Y9J4 135 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 MPDU1O75352 247 aa1.72□□□□□ -2.13
HIF1A-201ENST00000323441 SLC25A6P12236 298 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms