RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 RAB31Q13636 194 aa12.05□□□□□ -0.48
EXOSC4-201ENST00000316052 GUK1Q16774 197 aa12.05□□□□□ -0.48
EXOSC4-201ENST00000316052 HYLS1Q96M11 299 aa12.05□□□□□ -0.48
EXOSC4-201ENST00000316052 PYGO2Q9BRQ0 406 aa12.05□□□□□ -0.48
EXOSC4-201ENST00000316052 H3BNG1 76 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 M0R3E3 92 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 CAV2P51636 162 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 VWC2Q2TAL6 325 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 TTC32Q5I0X7 151 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 OR1L4Q8NGR5 311 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 GSN-AS1Q9NRJ2 163 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 UQCC1Q9NVA1 299 aa12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 MRPS16Q9Y3D3 137 aaKnown RBP12.04□□□□□ -0.48
EXOSC4-201ENST00000316052 ZNF324O75467 553 aaPredicted RBP12.03□□□□□ -0.48
EXOSC4-201ENST00000316052 NDUFB4O95168 129 aa12.03□□□□□ -0.48
EXOSC4-201ENST00000316052 RPL29P47914 159 aaKnown RBP12.03□□□□□ -0.48
EXOSC4-201ENST00000316052 C11orf72Q8NBR9 251 aa12.03□□□□□ -0.48
EXOSC4-201ENST00000316052 SLC39A9Q9NUM3 307 aa12.03□□□□□ -0.48
EXOSC4-201ENST00000316052 TRBV19A0A075B6N1 114 aa12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 A0A096LPF7 62 aa12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 C5orf51A6NDU8 294 aa12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 ZNF253O75346 499 aa12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 SLC25A5P05141 298 aaKnown RBP12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 C2orf50Q96LR7 162 aa12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 PFDN5Q99471 154 aa12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 AGPAT4-IT1Q9H0P7 198 aa12.02□□□□□ -0.49
EXOSC4-201ENST00000316052 FAT1Q14517 4588 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 UBE2L5PA0A1B0GUS4 154 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 A0A1W2PPQ1 181 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 IGSF23A1L1A6 192 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 C7orf71A4D174 169 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 KLLNB2CW77 178 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 IL15RAQ13261 267 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 BTN1A1Q13410 526 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 Q8N1X5 172 aa12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 MRPL53Q96EL3 112 aaKnown RBP12.01□□□□□ -0.49
EXOSC4-201ENST00000316052 PYYP10082 97 aa12□□□□□ -0.49
EXOSC4-201ENST00000316052 BTF3P20290 206 aaKnown RBP12□□□□□ -0.49
EXOSC4-201ENST00000316052 S100A11P31949 105 aa12□□□□□ -0.49
EXOSC4-201ENST00000316052 RNASE4P34096 147 aaKnown RBP12□□□□□ -0.49
EXOSC4-201ENST00000316052 SULT1A1P50225 295 aa12□□□□□ -0.49
EXOSC4-201ENST00000316052 BAXQ07812 192 aa12□□□□□ -0.49
EXOSC4-201ENST00000316052 TMEM252Q8N6L7 170 aa12□□□□□ -0.49
EXOSC4-201ENST00000316052 C18orf15Q96N68 181 aa12□□□□□ -0.49
EXOSC4-201ENST00000316052 LYRM2Q9NU23 88 aaPredicted RBP12□□□□□ -0.49
EXOSC4-201ENST00000316052 TMEM14CQ9P0S9 112 aa12□□□□□ -0.49
EXOSC4-201ENST00000316052 KLF12Q9Y4X4 402 aa12□□□□□ -0.49
EXOSC4-201ENST00000316052 HERC1Q15751 4861 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 TRGV2A0A075B6R0 118 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 TRGV1A0A0A0MS02 117 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 HIST1H1EP10412 219 aaKnown RBP11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 H2BFSP57053 126 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 GCSAMLQ5JQS6 135 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 Q6ZQT7 251 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 EXOC3-AS1Q8N2X6 119 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 LINC00477Q96M19 166 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 LINC00467Q9BRT7 94 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 SCRT2Q9NQ03 307 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 FUT9Q9Y231 359 aa11.99□□□□□ -0.49
EXOSC4-201ENST00000316052 PVALBP20472 110 aaPredicted RBP11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 FGF7P21781 194 aa11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 S100A10P60903 97 aa11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 CYCSP99999 105 aaKnown RBP11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 RAB32Q13637 225 aa11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 EIF4E3Q8N5X7 224 aaKnown RBP11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 ZNF680Q8NEM1 530 aa11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 OR2T35Q8NGX2 323 aa11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 BLNKQ8WV28 456 aa11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 TP53TG3Q9ULZ0 132 aa11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 TIMM9Q9Y5J7 89 aa11.98□□□□□ -0.49
EXOSC4-201ENST00000316052 G3V3Q6 166 aa11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 SPINK4O60575 86 aa11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 CRISP2P16562 243 aa11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 LINC00315P59091 139 aa11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 PRR9Q5T870 116 aa11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 Q6ZRN7 208 aaPredicted RBP11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 C9orf47Q6ZRZ4 202 aa11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 VGLL1Q99990 258 aa11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 PRELID1Q9Y255 219 aa11.97□□□□□ -0.49
EXOSC4-201ENST00000316052 IGKV2-40A0A087WW87 121 aaPredicted RBP11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 HMSDA8MTL9 139 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 MPDU1O75352 247 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 IGKV2D-40P01614 121 aaPredicted RBP11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 GPX1P07203 203 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 TCL1AP56279 114 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 HBG1P69891 147 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 HBG2P69892 147 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 PDE6HQ13956 83 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 STX12Q86Y82 276 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 ZFAND2AQ8N6M9 145 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 FAM167A-AS1Q96KT0 104 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 SLC25A2Q9BXI2 301 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 NMES1Q9C002 83 aa11.96□□□□□ -0.49
EXOSC4-201ENST00000316052 SIVA1O15304 175 aa11.95□□□□□ -0.5
EXOSC4-201ENST00000316052 IGHV3-53P01767 116 aa11.95□□□□□ -0.5
EXOSC4-201ENST00000316052 ICAM4Q14773 271 aa11.95□□□□□ -0.5
EXOSC4-201ENST00000316052 ATP6V1FQ16864 119 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms