RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 HIST1H1EP10412 219 aaKnown RBP5.94□□□□□ -1.46
TRIM55-202ENST00000315962 GPR183P32249 361 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 OR8A1Q8NGG7 326 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 ORAOV1Q8WV07 137 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 RPP21Q9H633 154 aaKnown RBP5.94□□□□□ -1.46
TRIM55-202ENST00000315962 K7EMI3 77 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 K7EP13 123 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 TAX1BP3O14907 124 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 CLEC3BP05452 202 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 CRYGCP07315 174 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 ARMS2P0C7Q2 107 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 IL17RELQ6ZVW7 336 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 DAZAP1Q96EP5 407 aaKnown RBP5.93□□□□□ -1.46
TRIM55-202ENST00000315962 Q9H3A6 140 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 TRAV8-6A0A0B4J262 113 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 IGHV1-69DA0A0B4J2H0 117 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 M0R3E3 92 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 SAP30O75446 220 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 IGHV1-69P01742 117 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 IGHV3-11P01762 117 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 PAX8Q06710 450 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 PRSS57Q6UWY2 283 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 PIFOQ8TCI5 191 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 RAB37Q96AX2 223 aa5.93□□□□□ -1.46
TRIM55-202ENST00000315962 MRPL27Q9P0M9 148 aaKnown RBP5.93□□□□□ -1.46
TRIM55-202ENST00000315962 SERTM2A0A1B0GWG4 89 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 INS-IGF2F8WCM5 200 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 RIPPLY3P57055 190 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 RHOGP84095 191 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 BVES-AS1Q5T3Y7 98 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 MINOS1Q5TGZ0 78 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 CLEC19AQ6UXS0 136 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 MRPL52Q86TS9 123 aaKnown RBP5.92□□□□□ -1.46
TRIM55-202ENST00000315962 SLC25A39Q9BZJ4 359 aaPredicted RBP5.92□□□□□ -1.46
TRIM55-202ENST00000315962 MRPS16Q9Y3D3 137 aaKnown RBP5.92□□□□□ -1.46
TRIM55-202ENST00000315962 MINOS1-NBL1R4GNA1 71 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 A0A1B0GXF2 115 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 F8W735 103 aaPredicted RBP5.92□□□□□ -1.46
TRIM55-202ENST00000315962 SMKR1H3BMG3 65 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 SMAD7O15105 426 aaKnown RBP5.92□□□□□ -1.46
TRIM55-202ENST00000315962 APOHP02749 345 aaPredicted RBP5.92□□□□□ -1.46
TRIM55-202ENST00000315962 Q8N6K4 173 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 THAP8Q8NA92 274 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 GPR82Q96P67 336 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 C21orf62Q9NYP8 219 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 HIGD1AQ9Y241 93 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 IGKV3-7A0A075B6H7 116 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 FNDC10F2Z333 226 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 ATP5IP56385 69 aaPredicted RBP5.92□□□□□ -1.46
TRIM55-202ENST00000315962 PSG9Q00887 426 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 SLC25A34Q6PIV7 304 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 C10orf99Q6UWK7 81 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 ZNF491Q8N8L2 437 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 OR1L4Q8NGR5 311 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 RNF5Q99942 180 aa5.92□□□□□ -1.46
TRIM55-202ENST00000315962 MRPL32Q9BYC8 188 aaKnown RBP5.92□□□□□ -1.46
TRIM55-202ENST00000315962 IGLV11-55A0A075B6I3 123 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 TOMM40O96008 361 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 TCRAP04437 139 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 RNF125Q96EQ8 232 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 TRGV9Q99603 122 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 TTTY13Q9BZ97 58 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 KLK15Q9H2R5 256 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 TRBV12-3P01733 135 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 IGHV4-59P01825 116 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 CTSGP08311 255 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
TRIM55-202ENST00000315962 KMT2BQ9UMN6 2715 aaPredicted RBP5.9□□□□□ -1.46
TRIM55-202ENST00000315962 TMEM213A2RRL7 107 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 A8MWL6 223 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 B4DSR2 109 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 HLA-DMBP28068 263 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 KLF5Q13887 457 aaPredicted RBP5.9□□□□□ -1.46
TRIM55-202ENST00000315962 COX19Q49B96 90 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 C5orf56Q8N8D9 126 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 WIPF2Q8TF74 440 aaPredicted RBP5.9□□□□□ -1.46
TRIM55-202ENST00000315962 C18orf15Q96N68 181 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 C8orf49Q96NF6 230 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 C1RLQ9NZP8 487 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 SORL1Q92673 2214 aa5.9□□□□□ -1.46
TRIM55-202ENST00000315962 GP9P14770 177 aa5.9□□□□□ -1.47
TRIM55-202ENST00000315962 IFI27P40305 119 aaPredicted RBP5.9□□□□□ -1.47
TRIM55-202ENST00000315962 MFAP4P55083 255 aa5.9□□□□□ -1.47
TRIM55-202ENST00000315962 FAM231DQ6ZW35 169 aa5.9□□□□□ -1.47
TRIM55-202ENST00000315962 MAP1LC3CQ9BXW4 147 aa5.9□□□□□ -1.47
TRIM55-202ENST00000315962 CSTL1Q9H114 145 aa5.9□□□□□ -1.47
TRIM55-202ENST00000315962 NOTCH3Q9UM47 2321 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 EBI3Q14213 229 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 DEFB112Q30KQ8 113 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 Q5PR19 223 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 RBPMS2Q6ZRY4 209 aaKnown RBP5.89□□□□□ -1.47
TRIM55-202ENST00000315962 Q86TA4 180 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 TTC9CQ8N5M4 171 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 TMEM75Q8N9X5 138 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 PRSS3P2Q8NHM4 247 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 Q96MF0 132 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 TMEM191AQ9H0A3 160 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 PDZD2O15018 2839 aa5.89□□□□□ -1.47
TRIM55-202ENST00000315962 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.89□□□□□ -1.47
TRIM55-202ENST00000315962 FBLL1A6NHQ2 334 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms