RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SFTA2Q6UW10 78 aa10.74□□□□□ -0.69
RFFL-201ENST00000315249 NIT1Q86X76 327 aa10.74□□□□□ -0.69
RFFL-201ENST00000315249 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 IGLV2-23P01705 113 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 LBHQ53QV2 105 aaPredicted RBP10.73□□□□□ -0.69
RFFL-201ENST00000315249 C8orf49Q96NF6 230 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 CDKN1BP46527 198 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 DMRTA1Q5VZB9 504 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 KIAA1549Q9HCM3 1950 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 MYO18BQ8IUG5 2567 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 NAV3Q8IVL0 2385 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 PAX4O43316 350 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 SERF1AO75920 110 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 ZFP36P26651 326 aaKnown RBP10.73□□□□□ -0.69
RFFL-201ENST00000315249 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
RFFL-201ENST00000315249 PDE6HQ13956 83 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 NCOR1P1Q9H4R4 102 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 GP9P14770 177 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 CCDC168Q8NDH2 2452 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 SPRY4Q9C004 299 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 ZNF561-AS1K7EIQ3 104 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 WT1-ASQ06250 92 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 A0A087WWC5 75 aa10.72□□□□□ -0.69
RFFL-201ENST00000315249 BCL6BQ8N143 479 aaPredicted RBP10.71□□□□□ -0.69
RFFL-201ENST00000315249 FAM90A2PQ658T7 463 aa10.71□□□□□ -0.69
RFFL-201ENST00000315249 A0A0J9YY99 117 aa10.71□□□□□ -0.69
RFFL-201ENST00000315249 A0A1B0GUS0 222 aa10.71□□□□□ -0.69
RFFL-201ENST00000315249 FNDC10F2Z333 226 aa10.71□□□□□ -0.69
RFFL-201ENST00000315249 PLNP26678 52 aa10.71□□□□□ -0.69
RFFL-201ENST00000315249 APRG1Q8IVJ8 170 aa10.71□□□□□ -0.69
RFFL-201ENST00000315249 NCOR2Q9Y618 2525 aa10.71□□□□□ -0.69
RFFL-201ENST00000315249 IFI27L1Q96BM0 104 aa10.71□□□□□ -0.7
RFFL-201ENST00000315249 RSPO3Q9BXY4 272 aaPredicted RBP10.71□□□□□ -0.7
RFFL-201ENST00000315249 PLP1P60201 277 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 HAPLN4Q86UW8 402 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 C19orf84I3L1E1 186 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 MORN3Q6PF18 240 aaPredicted RBP10.7□□□□□ -0.7
RFFL-201ENST00000315249 NUP35Q8NFH5 326 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 GNB1LQ9BYB4 327 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 IGF2RP11717 2491 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 IGHV1OR15-1A0A075B7D0 117 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 C11orf53Q8IXP5 236 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 PRRC2AP48634 2157 aaKnown RBP10.7□□□□□ -0.7
RFFL-201ENST00000315249 TRBV25-1A0A075B6N4 114 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 A0A1B0GV72 72 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 IGKCP01834 107 aa10.7□□□□□ -0.7
RFFL-201ENST00000315249 ATP5L2Q7Z4Y8 100 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 NOP10Q9NPE3 64 aaKnown RBP10.69□□□□□ -0.7
RFFL-201ENST00000315249 CARHSP1Q9Y2V2 147 aaKnown RBP10.69□□□□□ -0.7
RFFL-201ENST00000315249 C1orf194Q5T5A4 169 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 OR11H6Q8NGC7 330 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 LHBP01229 141 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 LGALS1P09382 135 aaKnown RBP10.69□□□□□ -0.7
RFFL-201ENST00000315249 CLPSL2Q6UWE3 100 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 TYMSP04818 313 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 GAGE6Q13070 117 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 PIFOQ8TCI5 191 aa10.69□□□□□ -0.7
RFFL-201ENST00000315249 VWC2Q2TAL6 325 aa10.68□□□□□ -0.7
RFFL-201ENST00000315249 INS-IGF2F8WCM5 200 aa10.68□□□□□ -0.7
RFFL-201ENST00000315249 FOXE3Q13461 319 aa10.68□□□□□ -0.7
RFFL-201ENST00000315249 GATD1Q8NB37 220 aa10.68□□□□□ -0.7
RFFL-201ENST00000315249 INAFM1C9JVW0 142 aa10.68□□□□□ -0.7
RFFL-201ENST00000315249 CTAG1AP78358 180 aa10.68□□□□□ -0.7
RFFL-201ENST00000315249 DLX4Q92988 240 aaPredicted RBP10.68□□□□□ -0.7
RFFL-201ENST00000315249 PAX2Q02962 417 aa10.67□□□□□ -0.7
RFFL-201ENST00000315249 Q86TA4 180 aa10.67□□□□□ -0.7
RFFL-201ENST00000315249 TRPT1Q86TN4 253 aaKnown RBP10.67□□□□□ -0.7
RFFL-201ENST00000315249 PLXNB1O43157 2135 aa10.67□□□□□ -0.7
RFFL-201ENST00000315249 RASL10AQ92737 203 aa10.67□□□□□ -0.7
RFFL-201ENST00000315249 Q9HAA7 133 aa10.67□□□□□ -0.7
RFFL-201ENST00000315249 SLC25A2Q9BXI2 301 aa10.67□□□□□ -0.7
RFFL-201ENST00000315249 ANXA2RQ3ZCQ2 193 aa10.67□□□□□ -0.7
RFFL-201ENST00000315249 GHRHP01286 108 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 SPXQ9BT56 116 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 ARHGAP32A7KAX9 2087 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 RHODO00212 210 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 LINC01551Q86U37 167 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 TMEM190Q8WZ59 177 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 F6UB75 175 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 H3BUA1 57 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 CDK2AP2O75956 126 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 A8MWV9 139 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 ANGP03950 147 aaKnown RBP10.66□□□□□ -0.7
RFFL-201ENST00000315249 ALPK3Q96L96 1907 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
RFFL-201ENST00000315249 TRBV19A0A075B6N1 114 aa10.65□□□□□ -0.7
RFFL-201ENST00000315249 CYTL1Q9NRR1 136 aa10.65□□□□□ -0.7
RFFL-201ENST00000315249 PFN1P07737 140 aaKnown RBP10.65□□□□□ -0.7
RFFL-201ENST00000315249 SEC11AP67812 179 aa10.65□□□□□ -0.7
RFFL-201ENST00000315249 WFDC11Q8NEX6 87 aa10.65□□□□□ -0.7
RFFL-201ENST00000315249 CHCHD1Q96BP2 118 aaKnown RBP10.65□□□□□ -0.7
RFFL-201ENST00000315249 RITA1Q96K30 269 aa10.65□□□□□ -0.7
RFFL-201ENST00000315249 C1orf147Q96MC9 270 aaPredicted RBP10.65□□□□□ -0.7
RFFL-201ENST00000315249 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.7
RFFL-201ENST00000315249 CBY1Q9Y3M2 126 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms