RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MPV17L2Q567V2 206 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 TNFRSF6BO95407 300 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 BVES-AS1Q5T3Y7 98 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 SCRT1Q9BWW7 348 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 SH2D1AO60880 128 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 LILRA1O75019 489 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 CEND1Q8N111 149 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 COL4A2P08572 1712 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 TRAV2A0A0B4J234 112 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 NCR2O95944 276 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 MDKP21741 143 aaPredicted RBP7.11□□□□□ -1.27
COL6A5-202ENST00000312481 CTRLP40313 264 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 PIEZO2Q9H5I5 2752 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 MALP21145 153 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 LYZL1Q6UWQ5 148 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 C2orf82Q6UX34 121 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 C18orf15Q96N68 181 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 ODF3Q96PU9 254 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 PRR25Q96S07 402 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 A0A1W2PPI3 338 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 TIMM23O14925 209 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 NDUFA3O95167 84 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 RNF224P0DH78 156 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 CD177Q8N6Q3 437 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 ZNF837Q96EG3 531 aaPredicted RBP7.1□□□□□ -1.27
COL6A5-202ENST00000312481 FNDC4Q9H6D8 234 aaPredicted RBP7.1□□□□□ -1.27
COL6A5-202ENST00000312481 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 MUC7Q8TAX7 377 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 DKK1O94907 266 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 NAV2Q8IVL1 2488 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 C9orf172C9J069 976 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 LINC01619G3V211 115 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 EVI2AP22794 236 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 RNF166Q96A37 237 aaPredicted RBP7.1□□□□□ -1.27
COL6A5-202ENST00000312481 FXYD5Q96DB9 178 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 HS3ST6Q96QI5 342 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 GTSF1LQ9H1H1 148 aa7.1□□□□□ -1.27
COL6A5-202ENST00000312481 IGKV1-6A0A0C4DH72 117 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 H0YGX0 51 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 USP9YO00507 2555 aaPredicted RBP7.09□□□□□ -1.27
COL6A5-202ENST00000312481 A0A087WX48 190 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 MUC21A0A0G2JKD1 596 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 MUC21A0A140T8X8 626 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 ERCC8Q13216 396 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 MUC21Q5SSG8 566 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 PYYP10082 97 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 Q6ZWC4 215 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 RNASE4P34096 147 aaKnown RBP7.09□□□□□ -1.27
COL6A5-202ENST00000312481 FOXC1Q12948 553 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 RNASE1P07998 156 aaKnown RBP7.09□□□□□ -1.27
COL6A5-202ENST00000312481 GTSCR1Q86UQ5 136 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 NPBQ8NG41 125 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 FN1P02751 2386 aaKnown RBP7.09□□□□□ -1.27
COL6A5-202ENST00000312481 F8P00451 2351 aa7.09□□□□□ -1.27
COL6A5-202ENST00000312481 CELA3BP08861 270 aa7.09□□□□□ -1.28
COL6A5-202ENST00000312481 KLRD1Q13241 179 aa7.09□□□□□ -1.28
COL6A5-202ENST00000312481 A0A0J9YXY3 114 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 SPINK8P0C7L1 97 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 FAM74A4Q5TZK3 123 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 Q6ZRM9 215 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 SPACA3Q8IXA5 215 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 H3BT86 120 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 CTSBP07858 339 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 STPG4Q8N801 248 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 CARD19Q96LW7 228 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 IGFL2Q6UWQ7 119 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 LAMTOR3Q9UHA4 124 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 FLG2Q5D862 2391 aaPredicted RBP7.08□□□□□ -1.28
COL6A5-202ENST00000312481 CEACAM8P31997 349 aaPredicted RBP7.08□□□□□ -1.28
COL6A5-202ENST00000312481 ZNF672Q499Z4 452 aaPredicted RBP7.08□□□□□ -1.28
COL6A5-202ENST00000312481 ATP5EP2Q5VTU8 51 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 TEN1Q86WV5 123 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 ZNF134P52741 427 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 NPYP01303 97 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 PLAURQ03405 335 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 TMEM158Q8WZ71 300 aa7.08□□□□□ -1.28
COL6A5-202ENST00000312481 TRAV5A0A0B4J249 113 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 C5orf63A6NC05 138 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 WIPF3A6NGB9 483 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 TCTEX1D4Q5JR98 221 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 IMUPQ9GZP8 106 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 STHQ8IWL8 128 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 ABCA12Q86UK0 2595 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 GAGE12HA6NDE8 117 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 PIK3CD-AS1Q5SR53 167 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 KLHDC3Q9BQ90 382 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 H7C2G1 150 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 CLEC19AQ6UXS0 136 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 ADAMTSL5Q6ZMM2 481 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 GPHA2Q96T91 129 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 CXCL5P42830 114 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 UBL5Q9BZL1 73 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 C11orf1Q9H5F2 150 aa7.07□□□□□ -1.28
COL6A5-202ENST00000312481 RNF114Q9Y508 228 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 SOCS3O14543 225 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 EGR1P18146 543 aa7.06□□□□□ -1.28
COL6A5-202ENST00000312481 SPTBN4Q9H254 2564 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms