RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 SPATA25Q9BR10 227 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 GTSF1LQ9H1H1 148 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 NRN1Q9NPD7 142 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 MRPL27Q9P0M9 148 aaKnown RBP6.32□□□□□ -1.4
CHD6-201ENST00000309279 CACNG5Q9UF02 275 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 COX11Q9Y6N1 276 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 FAM236DA0A1B0GTK5 79 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 FAM236CP0DP71 79 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 TFPI2P48307 235 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 LRRC37A5PQ49AS3 106 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 C15orf54Q8N8G6 183 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 RXFP4Q8TDU9 374 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 MBD3L1Q8WWY6 194 aa6.32□□□□□ -1.4
CHD6-201ENST00000309279 SNRPGP15A8MWD9 76 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 C9JAW5 83 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 NDUFB4O95168 129 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 OR5G3P0C626 314 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 SPNP16150 400 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 GAGE13Q4V321 117 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 ZNF114Q8NC26 417 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 USMG5Q96IX5 58 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 HIGD1AQ9Y241 93 aa6.31□□□□□ -1.4
CHD6-201ENST00000309279 IGLV11-55A0A075B6I3 123 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 FAM240AA0A1B0GVK7 77 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 PRH1P02810 166 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 TRGV3P03979 118 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 TPPP2P59282 170 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 S100A10P60903 97 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 ERHP84090 104 aaKnown RBP6.3□□□□□ -1.4
CHD6-201ENST00000309279 RPL18AQ02543 176 aaKnown RBP6.3□□□□□ -1.4
CHD6-201ENST00000309279 ZNF266Q14584 549 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 PVRIGQ6DKI7 326 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 C18orf65Q6ZTR6 163 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 Q6ZVH6 145 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 Q75L30 129 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 C4orf3Q8WVX3 66 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 EEF1AKMT3Q96AZ1 226 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 PLEKHA3Q9HB20 300 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 ZNF355PQ9NSJ1 428 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 F11RQ9Y624 299 aaKnown RBP6.3□□□□□ -1.4
CHD6-201ENST00000309279 U3KQE9 123 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 CMYA5Q8N3K9 4069 aa6.3□□□□□ -1.4
CHD6-201ENST00000309279 FAM223BA6NKX1 122 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 BUB3O43684 328 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 YIF1AO95070 293 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 NDUFB8O95169 186 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 DEFA4P12838 97 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 GNG4P50150 75 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 MFAP2P55001 183 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 RPL24P83731 157 aaKnown RBP6.29□□□□□ -1.4
CHD6-201ENST00000309279 OPCMLQ14982 345 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
CHD6-201ENST00000309279 NSUN5P1Q3KNT7 163 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 FAM223AQ8IWN6 122 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 SYT8Q8NBV8 401 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 KLHL30-AS1Q8NEE0 82 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 RBKSQ9H477 322 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 GNB4Q9HAV0 340 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 MGAM2Q2M2H8 2515 aa6.29□□□□□ -1.4
CHD6-201ENST00000309279 C7orf66A4D0T2 115 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 LYRM9A8MSI8 78 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 SMKR1H3BMG3 65 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 LGALS1P09382 135 aaKnown RBP6.28□□□□□ -1.4
CHD6-201ENST00000309279 TSPOP30536 169 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 GPR183P32249 361 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 PSG9Q00887 426 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 C15orf32Q32M92 178 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 SPINK9Q5DT21 86 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 FER1L6-AS1Q8NA97 138 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 PBDC1Q9BVG4 233 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 NOTCH3Q9UM47 2321 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 CEBPZOSA8MTT3 80 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 PHOX2AO14813 284 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 APOC3P02656 99 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 APOHP02749 345 aaPredicted RBP6.28□□□□□ -1.4
CHD6-201ENST00000309279 RNASE2P10153 161 aaKnown RBP6.28□□□□□ -1.4
CHD6-201ENST00000309279 CXCL3P19876 107 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 SNCAP37840 140 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 MYCNOSP40205 109 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 SUB1P53999 127 aaKnown RBP eCLIP6.28□□□□□ -1.4
CHD6-201ENST00000309279 ATP5G2Q06055 141 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 HSD52Q0P140 79 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 IL15RAQ13261 267 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 FAM106AQ4KMX7 169 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 BLNKQ8WV28 456 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 HYLS1Q96M11 299 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 KIR2DL4Q99706 377 aa6.28□□□□□ -1.4
CHD6-201ENST00000309279 ZNF436Q9C0F3 470 aaPredicted RBP6.28□□□□□ -1.4
CHD6-201ENST00000309279 SYNGR2O43760 224 aa6.27□□□□□ -1.41
CHD6-201ENST00000309279 NXPH3O95157 252 aa6.27□□□□□ -1.41
CHD6-201ENST00000309279 IGHV3-11P01762 117 aa6.27□□□□□ -1.41
CHD6-201ENST00000309279 ATP6V0CP27449 155 aa6.27□□□□□ -1.41
CHD6-201ENST00000309279 DEFA5Q01523 94 aa6.27□□□□□ -1.41
CHD6-201ENST00000309279 C2orf83Q53S99 150 aa6.27□□□□□ -1.41
CHD6-201ENST00000309279 MRPL55Q7Z7F7 128 aaKnown RBP6.27□□□□□ -1.41
CHD6-201ENST00000309279 WFDC9Q8NEX5 89 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms