RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 ZNF491Q8N8L2 437 aa4.21□□□□□ -1.74
USP8-201ENST00000307179 MBD3L2Q8NHZ7 208 aaPredicted RBP4.21□□□□□ -1.74
USP8-201ENST00000307179 TOMM6Q96B49 74 aa4.21□□□□□ -1.74
USP8-201ENST00000307179 SPRY3O43610 288 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 CFIP05156 583 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 P0DMU3 169 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 FAM231AP0DMU4 169 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 FAM231CP0DMU5 169 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 UTF1Q5T230 341 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 TMEM78Q5T7P6 136 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 TMEM160Q9NX00 188 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 CACNA1DQ01668 2161 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 BRWD1Q9NSI6 2320 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 SDK2Q58EX2 2172 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 TRAV40A0A0B4J280 105 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 PRRG2O14669 202 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 LGALS1P09382 135 aaKnown RBP4.2□□□□□ -1.74
USP8-201ENST00000307179 XGP55808 180 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 TMEM200BQ69YZ2 307 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 RAXQ9Y2V3 346 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 PCNX2A6NKB5 2137 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 MT-ATP8P03928 68 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 SCGB1C2P0DMR2 95 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 EGR2P11161 476 aaPredicted RBP4.2□□□□□ -1.74
USP8-201ENST00000307179 HLA-DMBP28068 263 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 MFAP4P55083 255 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 ATP5G2Q06055 141 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 HCP5Q6MZN7 132 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 C9orf106Q8NAJ2 232 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 RNF183Q96D59 192 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 TMEM126AQ9H061 195 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 LENEPQ9Y5L5 61 aa4.2□□□□□ -1.74
USP8-201ENST00000307179 TNFRSF13BO14836 293 aaPredicted RBP4.19□□□□□ -1.74
USP8-201ENST00000307179 FCN3O75636 299 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 SNCGO76070 127 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 RPL13AP40429 203 aaKnown RBP4.19□□□□□ -1.74
USP8-201ENST00000307179 SMCPP49901 116 aaPredicted RBP4.19□□□□□ -1.74
USP8-201ENST00000307179 NEXN-AS1Q8NBZ9 246 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 SMIM2Q9BVW6 85 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE12JA6NER3 117 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 C16orf97H3BN30 126 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 K7EIM0 57 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 M0R1B8 84 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE7O76087 117 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE12FP0CL80 117 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE12GP0CL81 117 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE12IP0CL82 117 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 IGHV1-8P0DP01 117 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE4Q13068 117 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 IGFL2Q6UWQ7 119 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 NRACQ8N912 160 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 PSMB2P49721 201 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE2BQ13066 116 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 ERCC8Q13216 396 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE2EQ4V326 116 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 DTX2Q86UW9 622 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 MAPKAPK5-AS1Q8N8E1 139 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 GAGE2DQ9UEU5 116 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 COL6A3P12111 3177 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 LOC400499M0QZD8 3231 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 TRAV17A0A0B4J275 112 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 H3BTX0 84 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 MSMPQ1L6U9 139 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 KLK9Q2XQG4 91 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 TDHQ8IZJ6 230 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 FBXL15Q9H469 300 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 KLK9Q9UKQ9 250 aa4.19□□□□□ -1.74
USP8-201ENST00000307179 KNL1Q8NG31 2342 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 TNCP24821 2201 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 SMKR1H3BMG3 65 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 CD7P09564 240 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 NDUFV3P56181 108 aaKnown RBP4.18□□□□□ -1.74
USP8-201ENST00000307179 LY6DQ14210 128 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 NDUFA11Q86Y39 141 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 OR10J6PQ8NGY7 276 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 TMEM141Q96I45 108 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 TPSG1Q9NRR2 321 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 SIT1Q9Y3P8 196 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.18□□□□□ -1.74
USP8-201ENST00000307179 IGHV1-3A0A0C4DH29 117 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 IFITM1P13164 125 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 COX6B1P14854 86 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 PRR31Q5SQ13 230 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 NFE4Q86UQ8 179 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 C10orf126Q8N4M7 172 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 NPBQ8NG41 125 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 CARD19Q96LW7 228 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 CHD9Q3L8U1 2897 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 ZNF815PA8K554 130 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 TMEM178BH3BS89 294 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 ENSAO43768 121 aaKnown RBP4.18□□□□□ -1.74
USP8-201ENST00000307179 ORM1P02763 201 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 INSL3P51460 131 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 AMTNQ6UX39 209 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 TIMD4Q96H15 378 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 SCGB3A1Q96QR1 104 aa4.18□□□□□ -1.74
USP8-201ENST00000307179 CEP290O15078 2479 aa4.17□□□□□ -1.74
USP8-201ENST00000307179 TRBV7-9A0A0J9YWB2 115 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms