RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 FAM231DQ6ZW35 169 aa13.2□□□□□ -0.3
KRT28-201ENST00000306658 NDFIP1Q9BT67 221 aa13.2□□□□□ -0.3
KRT28-201ENST00000306658 RNASE7Q9H1E1 156 aaKnown RBP13.2□□□□□ -0.3
KRT28-201ENST00000306658 SIGLEC8Q9NYZ4 499 aa13.2□□□□□ -0.3
KRT28-201ENST00000306658 K7EQG2 157 aa13.19□□□□□ -0.3
KRT28-201ENST00000306658 TFPI2P48307 235 aa13.19□□□□□ -0.3
KRT28-201ENST00000306658 TMEM78Q5T7P6 136 aa13.19□□□□□ -0.3
KRT28-201ENST00000306658 C9orf47Q6ZRZ4 202 aa13.19□□□□□ -0.3
KRT28-201ENST00000306658 FAM24BQ8N5W8 94 aa13.19□□□□□ -0.3
KRT28-201ENST00000306658 OR10J6PQ8NGY7 276 aa13.19□□□□□ -0.3
KRT28-201ENST00000306658 IMMP2LQ96T52 175 aa13.19□□□□□ -0.3
KRT28-201ENST00000306658 URGCP-MRPS24S4R325 110 aa13.19□□□□□ -0.3
KRT28-201ENST00000306658 ERCC8Q13216 396 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 DEFB114Q30KQ6 69 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 DAZAP1Q96EP5 407 aaKnown RBP13.18□□□□□ -0.3
KRT28-201ENST00000306658 PRR25Q96S07 402 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 ZNF492Q9P255 531 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 MAST4O15021 2626 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 COLCA2A8K830 154 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 CT45A10P0DMU9 189 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 ELOBQ15370 118 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 KCNIP4Q6PIL6 250 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 AGPAT4-IT1Q9H0P7 198 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 V9GYV3 84 aa13.18□□□□□ -0.3
KRT28-201ENST00000306658 ZNF705GA8MUZ8 300 aaPredicted RBP13.17□□□□□ -0.3
KRT28-201ENST00000306658 ZNF138P52744 262 aa13.17□□□□□ -0.3
KRT28-201ENST00000306658 COX8CQ7Z4L0 72 aa13.17□□□□□ -0.3
KRT28-201ENST00000306658 NUDT10Q8NFP7 164 aa13.17□□□□□ -0.3
KRT28-201ENST00000306658 Q8TAT8 98 aa13.17□□□□□ -0.3
KRT28-201ENST00000306658 NUDT11Q96G61 164 aa13.17□□□□□ -0.3
KRT28-201ENST00000306658 ZC2HC1AQ96GY0 325 aa13.17□□□□□ -0.3
KRT28-201ENST00000306658 LINC00477Q96M19 166 aa13.17□□□□□ -0.3
KRT28-201ENST00000306658 PPP1R14DQ9NXH3 145 aa13.17□□□□□ -0.3
KRT28-201ENST00000306658 GATCO43716 136 aaKnown RBP13.16□□□□□ -0.3
KRT28-201ENST00000306658 PF4P02776 101 aa13.16□□□□□ -0.3
KRT28-201ENST00000306658 PFN1P07737 140 aaKnown RBP13.16□□□□□ -0.3
KRT28-201ENST00000306658 TMEM61Q8N0U2 210 aa13.16□□□□□ -0.3
KRT28-201ENST00000306658 YPEL4Q96NS1 127 aa13.16□□□□□ -0.3
KRT28-201ENST00000306658 ASCL2Q99929 193 aa13.16□□□□□ -0.3
KRT28-201ENST00000306658 TRAV25A0A0B4J276 109 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 C19orf71A6NCJ1 209 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 P01737 135 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 ZNF688P0C7X2 276 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 OR8A1Q8NGG7 326 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 CITED1Q99966 193 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 IL36BQ9NZH7 164 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 LENEPQ9Y5L5 61 aa13.15□□□□□ -0.3
KRT28-201ENST00000306658 NPIPB6E9PJ23 425 aa13.15□□□□□ -0.31
KRT28-201ENST00000306658 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.31
KRT28-201ENST00000306658 SMUG1Q53HV7 270 aa13.15□□□□□ -0.31
KRT28-201ENST00000306658 PSMG4Q5JS54 123 aa13.15□□□□□ -0.31
KRT28-201ENST00000306658 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.31
KRT28-201ENST00000306658 ZNF705DP0CH99 300 aaPredicted RBP13.14□□□□□ -0.31
KRT28-201ENST00000306658 ZNF705BP0CI00 300 aaPredicted RBP13.14□□□□□ -0.31
KRT28-201ENST00000306658 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
KRT28-201ENST00000306658 SPAG8Q99932 426 aaPredicted RBP13.14□□□□□ -0.31
KRT28-201ENST00000306658 GPR61Q9BZJ8 451 aa13.14□□□□□ -0.31
KRT28-201ENST00000306658 TRBV24-1A0A075B6N3 115 aa13.13□□□□□ -0.31
KRT28-201ENST00000306658 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
KRT28-201ENST00000306658 OR4B1Q8NGF8 309 aa13.13□□□□□ -0.31
KRT28-201ENST00000306658 BTF3L4Q96K17 158 aa13.13□□□□□ -0.31
KRT28-201ENST00000306658 ATRQ13535 2644 aa13.13□□□□□ -0.31
KRT28-201ENST00000306658 TGIF2-C20orf24A0A0A6YYL0 155 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 F6UB75 175 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 SAP30O75446 220 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 FAM3BP58499 235 aaPredicted RBP13.12□□□□□ -0.31
KRT28-201ENST00000306658 RPP21Q9H633 154 aaKnown RBP13.12□□□□□ -0.31
KRT28-201ENST00000306658 A0A1W2PPQ1 181 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 RAB5AP20339 215 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 CRIP1P50238 77 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 CT83Q5H943 113 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 EBLN2Q6P2I7 272 aa13.12□□□□□ -0.31
KRT28-201ENST00000306658 SORL1Q92673 2214 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 TRAV9-1A0A075B6T8 112 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 A8MWL6 223 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 CXCL1P09341 107 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 DEFB1P60022 68 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 KRTAP24-1Q3LI83 254 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 LINC00482Q8N8I6 264 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 FAM210BQ96KR6 192 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 PYGO2Q9BRQ0 406 aa13.11□□□□□ -0.31
KRT28-201ENST00000306658 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
KRT28-201ENST00000306658 SMIM27A0A1W2PRY6 76 aa13.1□□□□□ -0.31
KRT28-201ENST00000306658 FABP5P3A8MUU1 101 aa13.1□□□□□ -0.31
KRT28-201ENST00000306658 TSKUQ8WUA8 353 aa13.1□□□□□ -0.31
KRT28-201ENST00000306658 A0A0J9YX75 114 aa13.09□□□□□ -0.31
KRT28-201ENST00000306658 SH2D1AO60880 128 aa13.09□□□□□ -0.31
KRT28-201ENST00000306658 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
KRT28-201ENST00000306658 FOXI2Q6ZQN5 318 aa13.09□□□□□ -0.31
KRT28-201ENST00000306658 OR2D3Q8NGH3 330 aa13.09□□□□□ -0.31
KRT28-201ENST00000306658 OR2K2Q8NGT1 345 aa13.09□□□□□ -0.31
KRT28-201ENST00000306658 RPL19P84098 196 aaKnown RBP13.08□□□□□ -0.31
KRT28-201ENST00000306658 SAV1Q9H4B6 383 aaPredicted RBP13.08□□□□□ -0.31
KRT28-201ENST00000306658 TENM1Q9UKZ4 2725 aa13.08□□□□□ -0.32
KRT28-201ENST00000306658 DUSP14O95147 198 aaKnown RBP13.08□□□□□ -0.32
KRT28-201ENST00000306658 IGLV1-51P01701 117 aa13.08□□□□□ -0.32
KRT28-201ENST00000306658 ZNF80P51504 273 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms