RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PRCDQ00LT1 54 aa8.67□□□□□ -1.02
LSM3-201ENST00000306024 ASCL2Q99929 193 aa8.67□□□□□ -1.02
LSM3-201ENST00000306024 HCP5Q6MZN7 132 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 MYOZ3Q8TDC0 251 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 CACNG8Q8WXS5 425 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 A0A1W2PPR1 153 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 IGLL5B9A064 214 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 IGKCP01834 107 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 TCRAP04437 139 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 HERV-K104P63124 156 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 CT83Q5H943 113 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 RPUSD1Q9UJJ7 312 aaKnown RBP8.66□□□□□ -1.02
LSM3-201ENST00000306024 INSIG2Q9Y5U4 225 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 RBP4P02753 201 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 LEPP41159 167 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 TMEM155Q4W5P6 130 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 AMN1Q8IY45 258 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 DPF1Q92782 380 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 CTSZQ9UBR2 303 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 ARHGAP32A7KAX9 2087 aa8.66□□□□□ -1.02
LSM3-201ENST00000306024 IGHV3-72A0A0B4J1Y9 119 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 A6NJY4 79 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 VWC2LB2RUY7 222 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 SMKR1H3BMG3 65 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 SAA2P0DJI9 122 aaPredicted RBP8.65□□□□□ -1.02
LSM3-201ENST00000306024 GFRA4Q9GZZ7 299 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 SIGLEC8Q9NYZ4 499 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 IGKV1OR2-108A0A075B7D4 117 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 UPK2O00526 184 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 DPM2O94777 84 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 LTAP01374 205 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 GAGE2BQ13066 116 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 TMEM30BQ3MIR4 351 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 PSMG4Q5JS54 123 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 SPATA25Q9BR10 227 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
LSM3-201ENST00000306024 OR11H12B2RN74 326 aa8.65□□□□□ -1.03
LSM3-201ENST00000306024 FNDC10F2Z333 226 aa8.65□□□□□ -1.03
LSM3-201ENST00000306024 HOXA3O43365 443 aaPredicted RBP8.65□□□□□ -1.03
LSM3-201ENST00000306024 INSL3P51460 131 aa8.65□□□□□ -1.03
LSM3-201ENST00000306024 KLF17Q5JT82 389 aaPredicted RBP8.65□□□□□ -1.03
LSM3-201ENST00000306024 CEND1Q8N111 149 aa8.65□□□□□ -1.03
LSM3-201ENST00000306024 OR11H1Q8NG94 326 aa8.65□□□□□ -1.03
LSM3-201ENST00000306024 OR11H2Q8NH07 326 aa8.65□□□□□ -1.03
LSM3-201ENST00000306024 ZNF502Q8TBZ5 544 aa8.65□□□□□ -1.03
LSM3-201ENST00000306024 HIGD1AQ9Y241 93 aa8.65□□□□□ -1.03
LSM3-201ENST00000306024 PRSS46E5RG02 174 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 HAX1O00165 279 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 MT-ATP8P03928 68 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 LOXP28300 417 aaPredicted RBP8.64□□□□□ -1.03
LSM3-201ENST00000306024 ATP5IP56385 69 aaPredicted RBP8.64□□□□□ -1.03
LSM3-201ENST00000306024 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 IGHV4-39P01824 125 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 PLA2G2AP14555 144 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 C2orf83Q53S99 150 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
LSM3-201ENST00000306024 TMEM14BQ9NUH8 114 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 FAM106CPP0CH98 169 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 C12orf74Q32Q52 190 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 FAM106AQ4KMX7 169 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 KAAG1Q9UBP8 84 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 ADGRG4Q8IZF6 3080 aa8.64□□□□□ -1.03
LSM3-201ENST00000306024 HELZ2Q9BYK8 2649 aaKnown RBP8.63□□□□□ -1.03
LSM3-201ENST00000306024 TRBV25-1A0A075B6N4 114 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 TRAV8-2A0A0B4J237 113 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 NDUFA3O95167 84 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 SAA1P0DJI8 122 aaPredicted RBP8.63□□□□□ -1.03
LSM3-201ENST00000306024 LOXL1Q08397 574 aaPredicted RBP8.63□□□□□ -1.03
LSM3-201ENST00000306024 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
LSM3-201ENST00000306024 EXOC3-AS1Q8N2X6 119 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 FAM167A-AS1Q96KT0 104 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 FLNCQ14315 2725 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 SONP18583 2426 aaKnown RBP8.63□□□□□ -1.03
LSM3-201ENST00000306024 IGHV3OR16-10A0A075B7F0 116 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 PRSS29PA6NIE9 313 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 ORM1P02763 201 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 RNASE2P10153 161 aaKnown RBP8.63□□□□□ -1.03
LSM3-201ENST00000306024 DLX1P56177 255 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 TMEM133Q9H2Q1 129 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 AAMDCQ9H7C9 122 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 FGF6P10767 208 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 FXYD5Q96DB9 178 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 HCFC1P51610 2035 aa8.63□□□□□ -1.03
LSM3-201ENST00000306024 TMEM213A2RRL7 107 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 IGHV1-8P0DP01 117 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 PRTN3P24158 256 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 Q1RN00 199 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 Q6AWC8 147 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 HIST2H2BCQ6DN03 193 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 C11orf71Q6IPW1 123 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 GLMPQ8WWB7 406 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 C1orf159Q96HA4 380 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 PRRC2AP48634 2157 aaKnown RBP8.62□□□□□ -1.03
LSM3-201ENST00000306024 FOXI1Q12951 378 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 C10orf55Q5SWW7 151 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 VCX2Q9H322 139 aa8.62□□□□□ -1.03
LSM3-201ENST00000306024 ZNRD1Q9P1U0 126 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms