RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 OR2D3Q8NGH3 330 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 OR5R1Q8NH85 324 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 PGLYRP4Q96LB8 373 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 C2orf88Q9BSF0 95 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 SSBP4Q9BWG4 385 aaPredicted RBP5.01□□□□□ -1.61
USP47-201ENST00000305481 GFRA4Q9GZZ7 299 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 SERTM2A0A1B0GWG4 89 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 SMAD7O15105 426 aaKnown RBP5.01□□□□□ -1.61
USP47-201ENST00000305481 SERF1AO75920 110 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 APCSP02743 223 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 CAMPP49913 170 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 C9orf139Q6ZV77 190 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 COX8CQ7Z4L0 72 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 ZNF575Q86XF7 245 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 OR4X2Q8NGF9 303 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 Q8TAT8 98 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 PRR25Q96S07 402 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 ZNF580Q9UK33 172 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 ESDP10768 282 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 ZNF80P51504 273 aaPredicted RBP5.01□□□□□ -1.61
USP47-201ENST00000305481 FOXA3P55318 350 aaPredicted RBP5.01□□□□□ -1.61
USP47-201ENST00000305481 Q6YL49 198 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 RBPMS2Q6ZRY4 209 aaKnown RBP5.01□□□□□ -1.61
USP47-201ENST00000305481 ATP5L2Q7Z4Y8 100 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 OR4B1Q8NGF8 309 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 FAM231BA6NCW3 169 aa5□□□□□ -1.61
USP47-201ENST00000305481 NDUFA4O00483 81 aa5□□□□□ -1.61
USP47-201ENST00000305481 PLA2G2AP14555 144 aa5□□□□□ -1.61
USP47-201ENST00000305481 PSMB8P28062 276 aa5□□□□□ -1.61
USP47-201ENST00000305481 SRIP30626 198 aa5□□□□□ -1.61
USP47-201ENST00000305481 ERCC8Q13216 396 aa5□□□□□ -1.61
USP47-201ENST00000305481 C8orf86Q6ZUL3 223 aa5□□□□□ -1.61
USP47-201ENST00000305481 GPHB5Q86YW7 130 aa5□□□□□ -1.61
USP47-201ENST00000305481 GLMPQ8WWB7 406 aa5□□□□□ -1.61
USP47-201ENST00000305481 RCHY1Q96PM5 261 aa5□□□□□ -1.61
USP47-201ENST00000305481 GOLT1BQ9Y3E0 138 aa5□□□□□ -1.61
USP47-201ENST00000305481 AKAP9Q99996 3911 aa5□□□□□ -1.61
USP47-201ENST00000305481 TLN2Q9Y4G6 2542 aa5□□□□□ -1.61
USP47-201ENST00000305481 A8MWP6 167 aa5□□□□□ -1.61
USP47-201ENST00000305481 TMEM18Q96B42 140 aa5□□□□□ -1.61
USP47-201ENST00000305481 PSMG3-AS1Q96PY0 264 aa5□□□□□ -1.61
USP47-201ENST00000305481 CUBNO60494 3623 aa5□□□□□ -1.61
USP47-201ENST00000305481 SH2D1AO60880 128 aa5□□□□□ -1.61
USP47-201ENST00000305481 JOSD1Q15040 202 aaPredicted RBP5□□□□□ -1.61
USP47-201ENST00000305481 OR10J3Q5JRS4 329 aa5□□□□□ -1.61
USP47-201ENST00000305481 PRSS57Q6UWY2 283 aa5□□□□□ -1.61
USP47-201ENST00000305481 TMEM208Q9BTX3 173 aa5□□□□□ -1.61
USP47-201ENST00000305481 VPREB3Q9UKI3 123 aa5□□□□□ -1.61
USP47-201ENST00000305481 ITPR2Q14571 2701 aa5□□□□□ -1.61
USP47-201ENST00000305481 CCDC168Q8NDH2 2452 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 HSBP1L1C9JCN9 74 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 HBBP68871 147 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 BAGE3Q86Y29 109 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 WFDC11Q8NEX6 87 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 SLC50A1Q9BRV3 221 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 HAX1O00165 279 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 HOXA3O43365 443 aaPredicted RBP4.99□□□□□ -1.61
USP47-201ENST00000305481 EDN2P20800 178 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 DDTP30046 118 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 FAM162BQ5T6X4 162 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 ALKBH7Q9BT30 221 aaPredicted RBP4.99□□□□□ -1.61
USP47-201ENST00000305481 A0A0G2JLM5 398 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 ARMS2P0C7Q2 107 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 CD33P20138 364 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 IQCJQ1A5X6 159 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 TM4SF20Q53R12 229 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 C18orf32Q8TCD1 76 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 C20orf173Q96LM9 149 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 AGPAT4-IT1Q9H0P7 198 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 ZNF702PQ9H963 129 aa4.99□□□□□ -1.61
USP47-201ENST00000305481 FLNAP21333 2647 aaKnown RBP4.98□□□□□ -1.61
USP47-201ENST00000305481 RBAKDNA6NC62 111 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 FBLL1A6NHQ2 334 aaKnown RBP4.98□□□□□ -1.61
USP47-201ENST00000305481 TMEM238C9JI98 176 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 SOCS3O14543 225 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 CT45A10P0DMU9 189 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 Q6ZWC4 215 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 NPFFR1Q9GZQ6 430 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 TMSB15BA0A087X1C1 80 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 A0A1W2PS18 150 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 DNLZQ5SXM8 178 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 IL17RELQ6ZVW7 336 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 CLEC5AQ9NY25 188 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 PEF1Q9UBV8 284 aaKnown RBP4.98□□□□□ -1.61
USP47-201ENST00000305481 RNF114Q9Y508 228 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 SELENOKQ9Y6D0 94 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 J3QKU1 62 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 RPLP1P05386 114 aaKnown RBP4.98□□□□□ -1.61
USP47-201ENST00000305481 BMI1P35226 326 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 KLF5Q13887 457 aaPredicted RBP4.98□□□□□ -1.61
USP47-201ENST00000305481 DUX5Q96PT3 197 aa4.98□□□□□ -1.61
USP47-201ENST00000305481 A0A1B0GUT8 65 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 TMEM189A5PLL7 270 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 DLEU1O43261 78 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 GPX1P07203 203 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 ZNF705DP0CH99 300 aaPredicted RBP4.97□□□□□ -1.61
USP47-201ENST00000305481 ZNF705BP0CI00 300 aaPredicted RBP4.97□□□□□ -1.61
USP47-201ENST00000305481 PAFAH1B2P68402 229 aa4.97□□□□□ -1.61
USP47-201ENST00000305481 MRPL53Q96EL3 112 aaKnown RBP4.97□□□□□ -1.61
USP47-201ENST00000305481 RHPN1-AS1Q9BWJ2 59 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms