RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 NDUFB4O95168 129 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 IFNA5P01569 189 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 SLC25A5P05141 298 aaKnown RBP7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 RPL12P30050 165 aaKnown RBP7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 ERCC8Q13216 396 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 ICAM4Q14773 271 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 TMEM78Q5T7P6 136 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 LINC00336Q6ZUF6 198 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 SCGB1C1Q8TD33 95 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 LINC00477Q96M19 166 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 PYGO2Q9BRQ0 406 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 PAXXQ9BUH6 204 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 SMIM3Q9BZL3 60 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 OR51M1Q9H341 326 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 FUT9Q9Y231 359 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 HSPB11Q9Y547 144 aa7.67□□□□□ -1.18
HMGN1P35-201ENST00000303758 C7orf71A4D174 169 aa7.66□□□□□ -1.18
HMGN1P35-201ENST00000303758 OR10J4P0C629 311 aa7.66□□□□□ -1.18
HMGN1P35-201ENST00000303758 NBEAP1P0C6P0 100 aa7.66□□□□□ -1.18
HMGN1P35-201ENST00000303758 FFAR4Q5NUL3 377 aa7.66□□□□□ -1.18
HMGN1P35-201ENST00000303758 MBD2Q9UBB5 411 aa7.66□□□□□ -1.18
HMGN1P35-201ENST00000303758 IGKV2-40A0A087WW87 121 aaPredicted RBP7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 GAGE12BA1L429 117 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 NACAE9PAV3 2078 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 GAGE7O76087 117 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 IGKV2D-40P01614 121 aaPredicted RBP7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 GPX1P07203 203 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 GAGE12FP0CL80 117 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 GAGE12GP0CL81 117 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 GAGE12IP0CL82 117 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 CSN1S1P47710 185 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 TAS2R45P59539 299 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 UBE2L3P68036 154 aaKnown RBP7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 BTN1A1Q13410 526 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 OR5I1Q13606 314 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 LGALS9BQ3B8N2 356 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 KHDC3LQ587J8 217 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 SOHLH1Q5JUK2 328 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 ZNF680Q8NEM1 530 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 RNF141Q8WVD5 230 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 PHYHIPLQ96FC7 376 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 FAM167A-AS1Q96KT0 104 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 FAT2Q9NYQ8 4349 aa7.65□□□□□ -1.18
HMGN1P35-201ENST00000303758 DNAH17Q9UFH2 4485 aa7.65□□□□□ -1.19
HMGN1P35-201ENST00000303758 RNASE4P34096 147 aaKnown RBP7.64□□□□□ -1.19
HMGN1P35-201ENST00000303758 CCL18P55774 89 aa7.64□□□□□ -1.19
HMGN1P35-201ENST00000303758 FAM3BP58499 235 aaPredicted RBP7.64□□□□□ -1.19
HMGN1P35-201ENST00000303758 FXYD5Q96DB9 178 aa7.64□□□□□ -1.19
HMGN1P35-201ENST00000303758 AGPAT4-IT1Q9H0P7 198 aa7.64□□□□□ -1.19
HMGN1P35-201ENST00000303758 ALG5Q9Y673 324 aa7.64□□□□□ -1.19
HMGN1P35-201ENST00000303758 LOC100996750A0A140TA64 210 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 PRSS29PA6NIE9 313 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 KLLNB2CW77 178 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 RGS13O14921 159 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 CD300CQ08708 224 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 ACOT6Q3I5F7 207 aaPredicted RBP7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 C9orf47Q6ZRZ4 202 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 EIF4E3Q8N5X7 224 aaKnown RBP7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 GNPNAT1Q96EK6 184 aaPredicted RBP7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 VGLL1Q99990 258 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 ARPC5LQ9BPX5 153 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 KRTAP4-6Q9BYQ5 205 aa7.63□□□□□ -1.19
HMGN1P35-201ENST00000303758 TRGV2A0A075B6R0 118 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 TRAV26-1A0A087WT03 109 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 A0A0J9YY99 117 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 A0A1W2PPV4 95 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 PTTG1O95997 202 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 CRISP2P16562 243 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 M6PRP20645 277 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 ZNF138P52744 262 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 FAM74A1Q5RGS3 127 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 LYPD1Q8N2G4 141 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 Q8TAT8 98 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 FAM19A4Q96LR4 140 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 Q9H3A6 140 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 GSN-AS1Q9NRJ2 163 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 ZNF492Q9P255 531 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 RPH3ALQ9UNE2 315 aa7.62□□□□□ -1.19
HMGN1P35-201ENST00000303758 TRGV1A0A0A0MS02 117 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 RTL8CO15255 209 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 ZNF324O75467 553 aaPredicted RBP7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 NMBP08949 121 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 DAZ2Q13117 558 aaKnown RBP7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 C1orf134Q5TEV5 83 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 Q6ZTI0 123 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 LINC00612Q8N6U2 182 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 CMTM2Q8TAZ6 248 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 HYLS1Q96M11 299 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 MED28Q9H204 178 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 TMPRSS5Q9H3S3 457 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 PKD1P98161 4303 aa7.61□□□□□ -1.19
HMGN1P35-201ENST00000303758 PKHD1P08F94 4074 aa7.6□□□□□ -1.19
HMGN1P35-201ENST00000303758 IGHV1OR15-1A0A075B7D0 117 aa7.6□□□□□ -1.19
HMGN1P35-201ENST00000303758 RBAKDNA6NC62 111 aa7.6□□□□□ -1.19
HMGN1P35-201ENST00000303758 EIF3GO75821 320 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGN1P35-201ENST00000303758 ZNF415Q09FC8 603 aa7.6□□□□□ -1.19
HMGN1P35-201ENST00000303758 ZNF266Q14584 549 aa7.6□□□□□ -1.19
HMGN1P35-201ENST00000303758 ANXA2RQ3ZCQ2 193 aa7.6□□□□□ -1.19
HMGN1P35-201ENST00000303758 PRR9Q5T870 116 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms