RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ERCC8Q13216 396 aa9.78□□□□□ -0.84
CCDC7-202ENST00000302316 PAFAH1B2P68402 229 aa9.77□□□□□ -0.84
CCDC7-202ENST00000302316 ELOBQ15370 118 aa9.77□□□□□ -0.84
CCDC7-202ENST00000302316 TMEM78Q5T7P6 136 aa9.77□□□□□ -0.84
CCDC7-202ENST00000302316 JMJD1CQ15652 2540 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 COLCA2A8K830 154 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 K7EQG2 157 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 S100PP25815 95 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 RBPMS2Q6ZRY4 209 aaKnown RBP9.77□□□□□ -0.85
CCDC7-202ENST00000302316 FAM231DQ6ZW35 169 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 ZC2HC1AQ96GY0 325 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 C8orf49Q96NF6 230 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 PRR25Q96S07 402 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 NDFIP1Q9BT67 221 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 V9GYV3 84 aa9.77□□□□□ -0.85
CCDC7-202ENST00000302316 TEP1Q99973 2627 aaKnown RBP9.77□□□□□ -0.85
CCDC7-202ENST00000302316 ZNF705GA8MUZ8 300 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-202ENST00000302316 SNRPD3P62318 126 aaKnown RBP9.76□□□□□ -0.85
CCDC7-202ENST00000302316 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 ZNF492Q9P255 531 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 ZNF688P0C7X2 276 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 ZNF705DP0CH99 300 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-202ENST00000302316 ZNF705BP0CI00 300 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-202ENST00000302316 CT45A10P0DMU9 189 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 DEFB1P60022 68 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 KCNIP4Q6PIL6 250 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-202ENST00000302316 C9orf47Q6ZRZ4 202 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 NUDT10Q8NFP7 164 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 OR10J6PQ8NGY7 276 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
CCDC7-202ENST00000302316 NUDT11Q96G61 164 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 GPR61Q9BZJ8 451 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 AGPAT4-IT1Q9H0P7 198 aa9.76□□□□□ -0.85
CCDC7-202ENST00000302316 TGIF2-C20orf24A0A0A6YYL0 155 aa9.75□□□□□ -0.85
CCDC7-202ENST00000302316 GATCO43716 136 aaKnown RBP9.75□□□□□ -0.85
CCDC7-202ENST00000302316 PF4P02776 101 aa9.75□□□□□ -0.85
CCDC7-202ENST00000302316 ZNF138P52744 262 aa9.75□□□□□ -0.85
CCDC7-202ENST00000302316 DEFB114Q30KQ6 69 aa9.75□□□□□ -0.85
CCDC7-202ENST00000302316 PSMG4Q5JS54 123 aa9.75□□□□□ -0.85
CCDC7-202ENST00000302316 F6UB75 175 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 P01737 135 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
CCDC7-202ENST00000302316 HIST1H1AQ02539 215 aaPredicted RBP9.74□□□□□ -0.85
CCDC7-202ENST00000302316 CD300EQ496F6 205 aaPredicted RBP9.74□□□□□ -0.85
CCDC7-202ENST00000302316 OR8A1Q8NGG7 326 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 IMMP2LQ96T52 175 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 SIGLEC8Q9NYZ4 499 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 IL36BQ9NZH7 164 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 MAST4O15021 2626 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 A0A1W2PPQ1 181 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 C19orf71A6NCJ1 209 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 CA1P00915 261 aaPredicted RBP9.74□□□□□ -0.85
CCDC7-202ENST00000302316 CXCL1P09341 107 aa9.74□□□□□ -0.85
CCDC7-202ENST00000302316 NPIPB6E9PJ23 425 aa9.73□□□□□ -0.85
CCDC7-202ENST00000302316 SAP30O75446 220 aa9.73□□□□□ -0.85
CCDC7-202ENST00000302316 FAM3BP58499 235 aaPredicted RBP9.73□□□□□ -0.85
CCDC7-202ENST00000302316 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
CCDC7-202ENST00000302316 COX8CQ7Z4L0 72 aa9.73□□□□□ -0.85
CCDC7-202ENST00000302316 RPP21Q9H633 154 aaKnown RBP9.73□□□□□ -0.85
CCDC7-202ENST00000302316 WNK1Q9H4A3 2382 aa9.73□□□□□ -0.85
CCDC7-202ENST00000302316 TRAV2A0A0B4J234 112 aa9.73□□□□□ -0.85
CCDC7-202ENST00000302316 CITED1Q99966 193 aa9.73□□□□□ -0.85
CCDC7-202ENST00000302316 TRBV24-1A0A075B6N3 115 aa9.72□□□□□ -0.85
CCDC7-202ENST00000302316 RAB5AP20339 215 aa9.72□□□□□ -0.85
CCDC7-202ENST00000302316 CRIP1P50238 77 aa9.72□□□□□ -0.85
CCDC7-202ENST00000302316 TCL1AP56279 114 aa9.72□□□□□ -0.85
CCDC7-202ENST00000302316 KRTAP24-1Q3LI83 254 aa9.72□□□□□ -0.85
CCDC7-202ENST00000302316 FAM162BQ5T6X4 162 aa9.72□□□□□ -0.85
CCDC7-202ENST00000302316 LINC00477Q96M19 166 aa9.72□□□□□ -0.85
CCDC7-202ENST00000302316 TRAV25A0A0B4J276 109 aa9.71□□□□□ -0.85
CCDC7-202ENST00000302316 SH2D1AO60880 128 aa9.71□□□□□ -0.85
CCDC7-202ENST00000302316 FAM210BQ96KR6 192 aa9.71□□□□□ -0.85
CCDC7-202ENST00000302316 SPAG8Q99932 426 aaPredicted RBP9.71□□□□□ -0.85
CCDC7-202ENST00000302316 PPP1R14DQ9NXH3 145 aa9.71□□□□□ -0.85
CCDC7-202ENST00000302316 OR4C46A6NHA9 309 aa9.71□□□□□ -0.86
CCDC7-202ENST00000302316 CT83Q5H943 113 aa9.71□□□□□ -0.86
CCDC7-202ENST00000302316 GDF5OSQ5U4N7 250 aa9.71□□□□□ -0.86
CCDC7-202ENST00000302316 LINC00482Q8N8I6 264 aa9.71□□□□□ -0.86
CCDC7-202ENST00000302316 OR4B1Q8NGF8 309 aa9.71□□□□□ -0.86
CCDC7-202ENST00000302316 OR2D3Q8NGH3 330 aa9.71□□□□□ -0.86
CCDC7-202ENST00000302316 LENEPQ9Y5L5 61 aa9.71□□□□□ -0.86
CCDC7-202ENST00000302316 SMIM27A0A1W2PRY6 76 aa9.7□□□□□ -0.86
CCDC7-202ENST00000302316 IZUMO1RA6ND01 250 aa9.7□□□□□ -0.86
CCDC7-202ENST00000302316 CD33P20138 364 aa9.7□□□□□ -0.86
CCDC7-202ENST00000302316 ZNF80P51504 273 aaPredicted RBP9.7□□□□□ -0.86
CCDC7-202ENST00000302316 EBLN2Q6P2I7 272 aa9.7□□□□□ -0.86
CCDC7-202ENST00000302316 PYGO2Q9BRQ0 406 aa9.7□□□□□ -0.86
CCDC7-202ENST00000302316 TENM1Q9UKZ4 2725 aa9.7□□□□□ -0.86
CCDC7-202ENST00000302316 DEFB131AP59861 70 aa9.7□□□□□ -0.86
CCDC7-202ENST00000302316 TSKUQ8WUA8 353 aa9.7□□□□□ -0.86
CCDC7-202ENST00000302316 A0A0J9YX75 114 aa9.69□□□□□ -0.86
CCDC7-202ENST00000302316 A8MWL6 223 aa9.69□□□□□ -0.86
CCDC7-202ENST00000302316 J3KRW8 73 aa9.69□□□□□ -0.86
CCDC7-202ENST00000302316 RPS10P46783 165 aaKnown RBP9.69□□□□□ -0.86
CCDC7-202ENST00000302316 RPL19P84098 196 aaKnown RBP9.69□□□□□ -0.86
CCDC7-202ENST00000302316 BTF3L4Q96K17 158 aa9.69□□□□□ -0.86
CCDC7-202ENST00000302316 ATRQ13535 2644 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms