RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 NF1P21359 2839 aa11.21□□□□□ -0.61
SMG8-201ENST00000300917 TRBV7-1A0A0A6YYK4 115 aa11.21□□□□□ -0.61
SMG8-201ENST00000300917 SERTM2A0A1B0GWG4 89 aa11.21□□□□□ -0.61
SMG8-201ENST00000300917 PDE6HQ13956 83 aa11.21□□□□□ -0.61
SMG8-201ENST00000300917 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.21□□□□□ -0.61
SMG8-201ENST00000300917 ITPR3Q14573 2671 aa11.21□□□□□ -0.61
SMG8-201ENST00000300917 FLNAP21333 2647 aaKnown RBP11.21□□□□□ -0.61
SMG8-201ENST00000300917 Q6ZQT7 251 aa11.21□□□□□ -0.62
SMG8-201ENST00000300917 IL17RELQ6ZVW7 336 aa11.21□□□□□ -0.62
SMG8-201ENST00000300917 LINC01356Q8N9X3 169 aa11.21□□□□□ -0.62
SMG8-201ENST00000300917 SMAD7O15105 426 aaKnown RBP11.2□□□□□ -0.62
SMG8-201ENST00000300917 ORM1P02763 201 aa11.2□□□□□ -0.62
SMG8-201ENST00000300917 Q0VG73 95 aa11.2□□□□□ -0.62
SMG8-201ENST00000300917 PRR25Q96S07 402 aa11.2□□□□□ -0.62
SMG8-201ENST00000300917 TCAPO15273 167 aa11.2□□□□□ -0.62
SMG8-201ENST00000300917 NAGKQ9UJ70 344 aa11.2□□□□□ -0.62
SMG8-201ENST00000300917 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
SMG8-201ENST00000300917 OR4X2Q8NGF9 303 aa11.2□□□□□ -0.62
SMG8-201ENST00000300917 TMEM213A2RRL7 107 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 TMEM189A5PLL7 270 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 HSBP1O75506 76 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 IGHG2P01859 326 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 ALKBH7Q9BT30 221 aaPredicted RBP11.19□□□□□ -0.62
SMG8-201ENST00000300917 NRN1Q9NPD7 142 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
SMG8-201ENST00000300917 ITPR2Q14571 2701 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 TSTD3H0UI37 97 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 GPX1P07203 203 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 DDTP30046 118 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 ATOH7Q8N100 152 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 SLC25A16P16260 332 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 TM4SF20Q53R12 229 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 LYZL1Q6UWQ5 148 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 C8orf86Q6ZUL3 223 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 KCNS1Q96KK3 526 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 C16orf92Q96LL3 132 aa11.19□□□□□ -0.62
SMG8-201ENST00000300917 COX19Q49B96 90 aa11.18□□□□□ -0.62
SMG8-201ENST00000300917 REC114Q7Z4M0 266 aa11.18□□□□□ -0.62
SMG8-201ENST00000300917 PAM16Q9Y3D7 125 aa11.18□□□□□ -0.62
SMG8-201ENST00000300917 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
SMG8-201ENST00000300917 NPIPB6E9PJ23 425 aa11.18□□□□□ -0.62
SMG8-201ENST00000300917 WFDC3Q8IUB2 231 aa11.18□□□□□ -0.62
SMG8-201ENST00000300917 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
SMG8-201ENST00000300917 Q96MF0 132 aa11.18□□□□□ -0.62
SMG8-201ENST00000300917 A8MWP6 167 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 ZNF324O75467 553 aaPredicted RBP11.17□□□□□ -0.62
SMG8-201ENST00000300917 OR10J3Q5JRS4 329 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 FAM162BQ5T6X4 162 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
SMG8-201ENST00000300917 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 A6NJY4 79 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 H0Y8G0 127 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 SPRY2O43597 315 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 DSCR9P59020 149 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 PAFAH1B2P68402 229 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 C19orf54Q5BKX5 351 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 CLEC5AQ9NY25 188 aa11.17□□□□□ -0.62
SMG8-201ENST00000300917 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 IGF1P05019 195 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 RAB9AP51151 201 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 PKIAP61925 76 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 CT83Q5H943 113 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 HECTD1Q9ULT8 2610 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 F6UB75 175 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 M0R2Z0 102 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 TFPI2P48307 235 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 NIT1Q86X76 327 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 OR4B1Q8NGF8 309 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
SMG8-201ENST00000300917 A0A096LNT2 108 aa11.15□□□□□ -0.62
SMG8-201ENST00000300917 MSRB1Q9NZV6 116 aa11.15□□□□□ -0.62
SMG8-201ENST00000300917 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
SMG8-201ENST00000300917 ZNF738Q8NE65 137 aa11.15□□□□□ -0.62
SMG8-201ENST00000300917 C20orf173Q96LM9 149 aa11.15□□□□□ -0.63
SMG8-201ENST00000300917 MCRIP2Q9BUT9 160 aaKnown RBP11.15□□□□□ -0.63
SMG8-201ENST00000300917 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.14□□□□□ -0.63
SMG8-201ENST00000300917 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 FXYD7P58549 80 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 SAPCD1Q5SSQ6 148 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 RASL11AQ6T310 242 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 NDFIP1Q9BT67 221 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 IGHV4-31P0DP07 118 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 NPFFR1Q9GZQ6 430 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
SMG8-201ENST00000300917 LOC102724200A0A096LPH7 203 aaPredicted RBP11.13□□□□□ -0.63
SMG8-201ENST00000300917 TWIST1Q15672 202 aa11.13□□□□□ -0.63
SMG8-201ENST00000300917 DEFB113Q30KQ7 82 aa11.13□□□□□ -0.63
SMG8-201ENST00000300917 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
SMG8-201ENST00000300917 HOXA3O43365 443 aaPredicted RBP11.13□□□□□ -0.63
SMG8-201ENST00000300917 C3orf79P0CE67 100 aa11.13□□□□□ -0.63
SMG8-201ENST00000300917 RIGQ13278 110 aa11.13□□□□□ -0.63
SMG8-201ENST00000300917 FOXE3Q13461 319 aa11.13□□□□□ -0.63
SMG8-201ENST00000300917 LINC00173Q6ZV60 143 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms