RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 BOD1L2Q8IYS8 172 aa13.91□□□□□ -0.18
TSPAN17-201ENST00000298564 SPTBN4Q9H254 2564 aa13.91□□□□□ -0.18
TSPAN17-201ENST00000298564 HLA-DMBP28068 263 aa13.91□□□□□ -0.18
TSPAN17-201ENST00000298564 CEACAM3P40198 252 aa13.91□□□□□ -0.18
TSPAN17-201ENST00000298564 VPS13CQ709C8 3753 aa13.91□□□□□ -0.18
TSPAN17-201ENST00000298564 TMEM189A5PLL7 270 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 H3BRM9 83 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 K7EP34 96 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 CT45A10P0DMU9 189 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 GATA1P15976 413 aaPredicted RBP13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 PRTN3P24158 256 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 RPS20P60866 119 aaKnown RBP13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 ADAMTSL5Q6ZMM2 481 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 MTURNQ8N3F0 131 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 IFI27L1Q96BM0 104 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 G3V4G9 280 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 C16orf54Q6UWD8 224 aa13.9□□□□□ -0.18
TSPAN17-201ENST00000298564 M0R1W7 72 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 SH2D1AO60880 128 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 FAM104BQ5XKR9 115 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 ORMDL3Q8N138 153 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 SRSF8Q9BRL6 282 aaKnown RBP13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 SPTBN1Q01082 2364 aaKnown RBP13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 A0A1W2PPR1 153 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 ODF3BA8MYP8 253 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 GNG7O60262 68 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 NDUFS7O75251 213 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 FXYD2P54710 66 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 NPBQ8NG41 125 aa13.89□□□□□ -0.19
TSPAN17-201ENST00000298564 DYNAPQ8N1N2 210 aa13.88□□□□□ -0.19
TSPAN17-201ENST00000298564 NDUFA3O95167 84 aa13.88□□□□□ -0.19
TSPAN17-201ENST00000298564 ZNF80P51504 273 aaPredicted RBP13.88□□□□□ -0.19
TSPAN17-201ENST00000298564 HBDP02042 147 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 ZNF491Q8N8L2 437 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 A0A1W2PPM0 123 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 K7EQM0 130 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 HOXB4P17483 251 aaPredicted RBP13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 LY6DQ14210 128 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 C5orf64Q2M2E5 130 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 VMO1Q7Z5L0 202 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 RNF125Q96EQ8 232 aa13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 SPTAN1Q13813 2472 aaKnown RBP13.87□□□□□ -0.19
TSPAN17-201ENST00000298564 NCBP2LA6PVI3 153 aaKnown RBP13.86□□□□□ -0.19
TSPAN17-201ENST00000298564 ZFP36P26651 326 aaKnown RBP13.86□□□□□ -0.19
TSPAN17-201ENST00000298564 GTSCR1Q86UQ5 136 aa13.86□□□□□ -0.19
TSPAN17-201ENST00000298564 TMEM14CQ9P0S9 112 aa13.86□□□□□ -0.19
TSPAN17-201ENST00000298564 HSD52Q0P140 79 aa13.86□□□□□ -0.19
TSPAN17-201ENST00000298564 PRSS1P07477 247 aa13.86□□□□□ -0.19
TSPAN17-201ENST00000298564 VGLL1Q99990 258 aa13.86□□□□□ -0.19
TSPAN17-201ENST00000298564 TEX48A0A1B0GUV7 120 aa13.85□□□□□ -0.19
TSPAN17-201ENST00000298564 LGALS9BQ3B8N2 356 aa13.85□□□□□ -0.19
TSPAN17-201ENST00000298564 SAMD5Q5TGI4 173 aa13.85□□□□□ -0.19
TSPAN17-201ENST00000298564 LGALS9CQ6DKI2 356 aa13.85□□□□□ -0.19
TSPAN17-201ENST00000298564 NPFFR1Q9GZQ6 430 aa13.85□□□□□ -0.19
TSPAN17-201ENST00000298564 GTSF1LQ9H1H1 148 aa13.85□□□□□ -0.19
TSPAN17-201ENST00000298564 ORM1P02763 201 aa13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 LEPP41159 167 aa13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 NDPQ00604 133 aa13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 LCNL1Q6ZST4 164 aa13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 DTX2Q86UW9 622 aa13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 CHD8Q9HCK8 2581 aa13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 H3BRN7 92 aa13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 FANCD2OSQ96PS1 177 aa13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 NHP2Q9NX24 153 aaKnown RBP13.84□□□□□ -0.19
TSPAN17-201ENST00000298564 ZNF562Q6V9R5 426 aa13.83□□□□□ -0.19
TSPAN17-201ENST00000298564 NCOR2Q9Y618 2525 aa13.83□□□□□ -0.2
TSPAN17-201ENST00000298564 IGHV3OR16-13A0A075B7E8 117 aa13.83□□□□□ -0.2
TSPAN17-201ENST00000298564 IGHV3-74A0A0B4J1X5 117 aa13.83□□□□□ -0.2
TSPAN17-201ENST00000298564 WI2-2373I1.2A0A1W2PRP0 233 aa13.83□□□□□ -0.2
TSPAN17-201ENST00000298564 FABP2P12104 132 aa13.83□□□□□ -0.2
TSPAN17-201ENST00000298564 TMEM11P17152 192 aa13.83□□□□□ -0.2
TSPAN17-201ENST00000298564 ARPC1AQ92747 370 aa13.83□□□□□ -0.2
TSPAN17-201ENST00000298564 ERCC8Q13216 396 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 AAMDCQ9H7C9 122 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 AGRNO00468 2067 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 ZNF493Q6ZR52 646 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 NEGR1Q7Z3B1 354 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 IGLV11-55A0A075B6I3 123 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 IGHV3-66A0A0C4DH42 116 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 CCDC144NLQ6NUI1 221 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 S100A7AQ86SG5 101 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 UBTD1Q9HAC8 227 aa13.82□□□□□ -0.2
TSPAN17-201ENST00000298564 HIVEP3Q5T1R4 2406 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 CUBNO60494 3623 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 SMIM13P0DJ93 91 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 PAX8Q06710 450 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 SMAGPQ0VAQ4 97 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 AMTNQ6UX39 209 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 C1orf122Q6ZSJ8 110 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 TMEM160Q9NX00 188 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 MRPS12O15235 138 aaKnown RBP13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 FOXC2Q99958 501 aa13.81□□□□□ -0.2
TSPAN17-201ENST00000298564 TRAV26-2A0A0B4J265 109 aa13.8□□□□□ -0.2
TSPAN17-201ENST00000298564 MFAP4P55083 255 aa13.8□□□□□ -0.2
TSPAN17-201ENST00000298564 OR9G4Q8NGQ1 327 aa13.8□□□□□ -0.2
TSPAN17-201ENST00000298564 F8W735 103 aaPredicted RBP13.8□□□□□ -0.2
TSPAN17-201ENST00000298564 SPRY2O43597 315 aa13.8□□□□□ -0.2
TSPAN17-201ENST00000298564 FCER1GP30273 86 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms