RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 MT-ND4LP03901 98 aa11.5□□□□□ -0.57
NCK1-201ENST00000288986 DEFB121Q5J5C9 76 aa11.5□□□□□ -0.57
NCK1-201ENST00000288986 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
NCK1-201ENST00000288986 SMIM12Q96EX1 92 aa11.5□□□□□ -0.57
NCK1-201ENST00000288986 FMC1Q96HJ9 113 aa11.5□□□□□ -0.57
NCK1-201ENST00000288986 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
NCK1-201ENST00000288986 MS4A6AQ9H2W1 248 aa11.5□□□□□ -0.57
NCK1-201ENST00000288986 TRAV34A0A0B4J273 112 aa11.49□□□□□ -0.57
NCK1-201ENST00000288986 GCGP01275 180 aa11.49□□□□□ -0.57
NCK1-201ENST00000288986 IGLV2-11P01706 119 aa11.49□□□□□ -0.57
NCK1-201ENST00000288986 CD7P09564 240 aa11.49□□□□□ -0.57
NCK1-201ENST00000288986 C15orf54Q8N8G6 183 aa11.49□□□□□ -0.57
NCK1-201ENST00000288986 OR4C46A6NHA9 309 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 COLCA2A8K830 154 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 DIRC3C9JPN6 131 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 K7EIL1 84 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 M0R3E3 92 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 MLST8Q9BVC4 326 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 SERTM2A0A1B0GWG4 89 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 LTAP01374 205 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 MRAPQ8TCY5 172 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 SFRP2Q96HF1 295 aa11.48□□□□□ -0.57
NCK1-201ENST00000288986 UBE2G1P62253 170 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 GOLT1AQ6ZVE7 132 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 BAGE2Q86Y30 109 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 Q8N1Y9 231 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.47□□□□□ -0.57
NCK1-201ENST00000288986 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 TRAV8-2A0A0B4J237 113 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 PPP1R2P9O14990 202 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 Q86TA4 180 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 MRPL53Q96EL3 112 aaKnown RBP11.47□□□□□ -0.57
NCK1-201ENST00000288986 NRN1Q9NPD7 142 aa11.47□□□□□ -0.57
NCK1-201ENST00000288986 SOCS3O14543 225 aa11.46□□□□□ -0.58
NCK1-201ENST00000288986 CLEC5AQ9NY25 188 aa11.46□□□□□ -0.58
NCK1-201ENST00000288986 OR11H12B2RN74 326 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 H7BYZ3 331 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 PFN1P07737 140 aaKnown RBP11.45□□□□□ -0.58
NCK1-201ENST00000288986 HLA-DMBP28068 263 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 CSN1S1P47710 185 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 ELOBQ15370 118 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 PSG3Q16557 428 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 DCANP1Q8TF63 244 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 OSTCQ9NRP0 149 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 TRAV8-1A0A0A6YYK1 113 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 K7EQM0 130 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 OR5I1Q13606 314 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 SGK494Q96LW2 274 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 WFDC10AQ9H1F0 79 aa11.45□□□□□ -0.58
NCK1-201ENST00000288986 TRAV2A0A0B4J234 112 aa11.44□□□□□ -0.58
NCK1-201ENST00000288986 FBLL1A6NHQ2 334 aaKnown RBP11.44□□□□□ -0.58
NCK1-201ENST00000288986 FLI1Q01543 452 aaPredicted RBP11.44□□□□□ -0.58
NCK1-201ENST00000288986 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
NCK1-201ENST00000288986 FAM231DQ6ZW35 169 aa11.44□□□□□ -0.58
NCK1-201ENST00000288986 FAM24BQ8N5W8 94 aa11.44□□□□□ -0.58
NCK1-201ENST00000288986 DEFB125Q8N687 156 aa11.44□□□□□ -0.58
NCK1-201ENST00000288986 OR10G8Q8NGN5 311 aa11.44□□□□□ -0.58
NCK1-201ENST00000288986 RBAKDNA6NC62 111 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 K7EQG2 157 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 IGHV4-30-4P0DP06 118 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 TMEM183AQ8IXX5 376 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 IMMP2LQ96T52 175 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 PSG8Q9UQ74 426 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 ZFP30Q9Y2G7 519 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 ODF3L2Q3SX64 289 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 NHLRC2Q8NBF2 726 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 PYGO2Q9BRQ0 406 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 C19orf73Q9NVV2 129 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 V9GYV3 84 aa11.43□□□□□ -0.58
NCK1-201ENST00000288986 TRBV24-1A0A075B6N3 115 aa11.42□□□□□ -0.58
NCK1-201ENST00000288986 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
NCK1-201ENST00000288986 CMC4P56277 68 aaPredicted RBP11.42□□□□□ -0.58
NCK1-201ENST00000288986 COX8CQ7Z4L0 72 aa11.42□□□□□ -0.58
NCK1-201ENST00000288986 APRG1Q8IVJ8 170 aa11.42□□□□□ -0.58
NCK1-201ENST00000288986 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
NCK1-201ENST00000288986 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
NCK1-201ENST00000288986 ZNF705FA8MVS1 300 aaPredicted RBP11.41□□□□□ -0.58
NCK1-201ENST00000288986 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
NCK1-201ENST00000288986 MGST1P10620 155 aaKnown RBP11.41□□□□□ -0.58
NCK1-201ENST00000288986 DEFB131AP59861 70 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 ERVFC1-1P60608 527 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 SNRPD3P62318 126 aaKnown RBP11.41□□□□□ -0.58
NCK1-201ENST00000288986 PRNTQ86SH4 94 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 MAP6D1Q9H9H5 199 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 BIN3Q9NQY0 253 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 ZNF492Q9P255 531 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 URGCP-MRPS24S4R325 110 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 CXCL1P09341 107 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 ID1P41134 155 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
NCK1-201ENST00000288986 C16orf92Q96LL3 132 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 FAM110AQ9BQ89 295 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 RNASE7Q9H1E1 156 aaKnown RBP11.41□□□□□ -0.58
NCK1-201ENST00000288986 SRD5A3Q9H8P0 318 aa11.41□□□□□ -0.58
NCK1-201ENST00000288986 PRKDCP78527 4128 aaKnown RBP11.4□□□□□ -0.58
NCK1-201ENST00000288986 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.58
NCK1-201ENST00000288986 PRAC2D3DTV9 90 aa11.4□□□□□ -0.58
NCK1-201ENST00000288986 RAB5AP20339 215 aa11.4□□□□□ -0.58
NCK1-201ENST00000288986 ZNF124Q15973 351 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms