RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 LINC00477Q96M19 166 aa9.25□□□□□ -0.93
SS18-202ENST00000269138 EDA2RQ9HAV5 297 aa9.25□□□□□ -0.93
SS18-202ENST00000269138 ZNF705EA8MWA4 302 aaPredicted RBP9.24□□□□□ -0.93
SS18-202ENST00000269138 J3KRW8 73 aa9.24□□□□□ -0.93
SS18-202ENST00000269138 DEFB4AO15263 64 aa9.24□□□□□ -0.93
SS18-202ENST00000269138 RBMY1A1P0DJD3 496 aaKnown RBP9.24□□□□□ -0.93
SS18-202ENST00000269138 RBMY1CP0DJD4 496 aa9.24□□□□□ -0.93
SS18-202ENST00000269138 RAB5CP51148 216 aa9.24□□□□□ -0.93
SS18-202ENST00000269138 RBMY1FQ15415 496 aaKnown RBP9.24□□□□□ -0.93
SS18-202ENST00000269138 ZNF705AQ6ZN79 300 aaPredicted RBP9.24□□□□□ -0.93
SS18-202ENST00000269138 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
SS18-202ENST00000269138 Q8TAT8 98 aa9.24□□□□□ -0.93
SS18-202ENST00000269138 CMTM2Q8TAZ6 248 aa9.24□□□□□ -0.93
SS18-202ENST00000269138 A0A0J9YWU9 116 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 A0A1W2PRE2 83 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 FAM74A7A6NL05 159 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 AMBPP02760 352 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 PRM2P04554 102 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 CDKN1BP46527 198 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 CCL20P78556 96 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 ALKAL2Q6UX46 152 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 FAM19A4Q96LR4 140 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
SS18-202ENST00000269138 TRAV8-1A0A0A6YYK1 113 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 IGHV4-28A0A0C4DH34 117 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 RBAKDNA6NC62 111 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 INSP01308 110 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 TSPOP30536 169 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 LEPP41159 167 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 ZNF138P52744 262 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 TMEM78Q5T7P6 136 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 Q8NAQ8 132 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 C5orf17Q8NAS9 161 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 WWC2-AS2Q96NR7 200 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 ZNF492Q9P255 531 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 EPDR1Q9UM22 224 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 GOLT1BQ9Y3E0 138 aa9.22□□□□□ -0.93
SS18-202ENST00000269138 PAGE4O60829 102 aa9.21□□□□□ -0.93
SS18-202ENST00000269138 TCRAP04437 139 aa9.21□□□□□ -0.93
SS18-202ENST00000269138 ARL6IP6Q8N6S5 226 aa9.21□□□□□ -0.93
SS18-202ENST00000269138 TRAV1-1A0A0B4J248 108 aa9.21□□□□□ -0.94
SS18-202ENST00000269138 ZNF705GA8MUZ8 300 aaPredicted RBP9.21□□□□□ -0.94
SS18-202ENST00000269138 IFNA7P01567 189 aa9.21□□□□□ -0.94
SS18-202ENST00000269138 ATP5G3P48201 142 aa9.21□□□□□ -0.94
SS18-202ENST00000269138 PRR9Q5T870 116 aa9.21□□□□□ -0.94
SS18-202ENST00000269138 CST9LP1Q5W188 147 aa9.21□□□□□ -0.94
SS18-202ENST00000269138 ZFAND2AQ8N6M9 145 aa9.21□□□□□ -0.94
SS18-202ENST00000269138 TMEM208Q9BTX3 173 aa9.21□□□□□ -0.94
SS18-202ENST00000269138 TRAV12-3A0A0B4J271 114 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 KLLNB2CW77 178 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 MIFP14174 115 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 CRISP2P16562 243 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 RNASE4P34096 147 aaKnown RBP9.2□□□□□ -0.94
SS18-202ENST00000269138 BTN1A1Q13410 526 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 Q6ZQT7 251 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 CCDC28AQ8IWP9 274 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 TVP23CQ96ET8 276 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 LINC00479Q96M42 142 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 LINC01587Q99440 93 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 NEU1Q99519 415 aa9.2□□□□□ -0.94
SS18-202ENST00000269138 TRAV34A0A0B4J273 112 aa9.19□□□□□ -0.94
SS18-202ENST00000269138 IGLV2-11P01706 119 aa9.19□□□□□ -0.94
SS18-202ENST00000269138 GPX1P07203 203 aa9.19□□□□□ -0.94
SS18-202ENST00000269138 GNG13Q9P2W3 67 aa9.19□□□□□ -0.94
SS18-202ENST00000269138 C7orf71A4D174 169 aa9.18□□□□□ -0.94
SS18-202ENST00000269138 PEX7O00628 323 aa9.18□□□□□ -0.94
SS18-202ENST00000269138 AZU1P20160 251 aa9.18□□□□□ -0.94
SS18-202ENST00000269138 CYB561D1Q8N8Q1 229 aa9.18□□□□□ -0.94
SS18-202ENST00000269138 ATG101Q9BSB4 218 aa9.18□□□□□ -0.94
SS18-202ENST00000269138 NKX6-2Q9C056 277 aaPredicted RBP9.18□□□□□ -0.94
SS18-202ENST00000269138 C11orf68Q9H3H3 251 aaKnown RBP9.18□□□□□ -0.94
SS18-202ENST00000269138 PSG8Q9UQ74 426 aa9.18□□□□□ -0.94
SS18-202ENST00000269138 TRBV7-9A0A0J9YWB2 115 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 SERTM2A0A1B0GWG4 89 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 ZNF324O75467 553 aaPredicted RBP9.17□□□□□ -0.94
SS18-202ENST00000269138 HBE1P02100 147 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 NMBP08949 121 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 HTN1P15515 57 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 EMP1P54849 157 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 RRN3P1Q2M238 152 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 TMEM256Q8N2U0 113 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 ARL2-SNX15V9GYD0 113 aa9.17□□□□□ -0.94
SS18-202ENST00000269138 LOC102723971A0A1B0GUV8 181 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 H7BYZ3 331 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 K7EQM0 130 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 PPT1P50897 306 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 FLI1Q01543 452 aaPredicted RBP9.16□□□□□ -0.94
SS18-202ENST00000269138 PRNTQ86SH4 94 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 IL17DQ8TAD2 202 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 C20orf144Q9BQM9 153 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
SS18-202ENST00000269138 F6UZH7 168 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 TEX46H3BTG2 121 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 TAS2R60P59551 318 aa9.15□□□□□ -0.94
SS18-202ENST00000269138 BLOC1S1P78537 153 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms