RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 A0A1W2PPM0 123 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 ARPC1AQ92747 370 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 ZNF747Q9BV97 191 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 CYSLTR1Q9Y271 337 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 HTN1P15515 57 aa9.21□□□□□ -0.94
CLSTN3-201ENST00000266546 FAM104BQ5XKR9 115 aa9.21□□□□□ -0.94
CLSTN3-201ENST00000266546 Q8TAT8 98 aa9.21□□□□□ -0.94
CLSTN3-201ENST00000266546 TMEM158Q8WZ71 300 aa9.21□□□□□ -0.94
CLSTN3-201ENST00000266546 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 ETDBQ3ZM63 59 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 A0A0C4DFX4 3053 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 SAP30O75446 220 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 P0C879 139 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 PPP1R17O96001 155 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 LAGE3Q14657 143 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 LYPD2Q6UXB3 125 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 C11orf44Q8N8P7 122 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 IGF2BP2-AS1Q96M15 143 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 TSSC4Q9Y5U2 329 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 IGHV1-8P0DP01 117 aa9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 CHTOPQ9Y3Y2 248 aaKnown RBP9.2□□□□□ -0.94
CLSTN3-201ENST00000266546 ORMDL2Q53FV1 153 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 ANAPC13Q9BS18 74 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 SIGLEC8Q9NYZ4 499 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 TRIOO75962 3097 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 TRAV8-2A0A0B4J237 113 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 RHOGP84095 191 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 TIMM23O14925 209 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 NDUFB8O95169 186 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 ASIPP42127 132 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 MSMPQ1L6U9 139 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 MORN5Q5VZ52 161 aa9.19□□□□□ -0.94
CLSTN3-201ENST00000266546 A8MWV9 139 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 SSBP2P81877 361 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 SHANK2-AS3Q9BTD1 123 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 LY6HO94772 140 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 CTRLP40313 264 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 DSCR9P59020 149 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 DUX5Q96PT3 197 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 FN1P02751 2386 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 IGHV1-3A0A0C4DH29 117 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 COL8A2P25067 703 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 TMEM75Q8N9X5 138 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 SLC50A1Q9BRV3 221 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 SCRT2Q9NQ03 307 aa9.18□□□□□ -0.94
CLSTN3-201ENST00000266546 C2orf70A6NJV1 201 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 TMEM262E9PQX1 116 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 M0R1W7 72 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 LTAP01374 205 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 PLNP26678 52 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 PAPPA-AS1Q5QFB9 102 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 DLX4Q92988 240 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 EEF1AKMT3Q96AZ1 226 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 TRAV40A0A0B4J280 105 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 SPRNQ5BIV9 151 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 TRBV19A0A075B6N1 114 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 IGKV1OR2-108A0A075B7D4 117 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 RBX1P62877 108 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 CR1LQ2VPA4 569 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 ZNF833PQ6ZTB9 187 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 ZC2HC1AQ96GY0 325 aa9.17□□□□□ -0.94
CLSTN3-201ENST00000266546 TNFRSF6BO95407 300 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 ID1P41134 155 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 BRWD1-AS2P59051 145 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 DAZAP2Q15038 168 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 CD300EQ496F6 205 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 LINC00311Q8N616 119 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 THAP8Q8NA92 274 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 PSMB11A5LHX3 300 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 PRSS46E5RG02 174 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 SIVA1O15304 175 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 IGLC1P0CG04 106 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 AZU1P20160 251 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 EMP1P54849 157 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 ZNF562Q6V9R5 426 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 ITLN2Q8WWU7 325 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 ANKRD39Q53RE8 183 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 MAPK1IP1LQ8NDC0 245 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 GAGE12HA6NDE8 117 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 OOSP1A8MZH6 123 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 F8W1H4 67 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 GRNP28799 593 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 PDE6HQ13956 83 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 C8orf31Q8N9H6 132 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 RNF5Q99942 180 aa9.16□□□□□ -0.94
CLSTN3-201ENST00000266546 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
CLSTN3-201ENST00000266546 ATP5G2Q06055 141 aa9.15□□□□□ -0.94
CLSTN3-201ENST00000266546 ZNF56Q15929 161 aa9.15□□□□□ -0.94
CLSTN3-201ENST00000266546 IGFL4Q6B9Z1 124 aa9.15□□□□□ -0.94
CLSTN3-201ENST00000266546 CLEC19AQ6UXS0 136 aa9.15□□□□□ -0.94
CLSTN3-201ENST00000266546 SYT8Q8NBV8 401 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms