RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 FOLR2P14207 255 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 AP5S1Q9NUS5 200 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 ACANP16112 2415 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 SLURP1P55000 103 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 CFAP54Q96N23 3096 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 IGKV1D-37A0A075B6S9 117 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 NUDT3O95989 172 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 PLP1P60201 277 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 ASPHD1Q5U4P2 390 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 C11orf52Q96A22 123 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 Q6YL49 198 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 FAM167A-AS1Q96KT0 104 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 RAI1Q7Z5J4 1906 aaPredicted RBP11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 DNAJC9-AS1A6NH13 148 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 F2Z2F3 143 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 UBE2E2Q96LR5 201 aa11.24□□□□□ -0.61
PDLIM2-201ENST00000265810 GP9P14770 177 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 VGLL1Q99990 258 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 ANKRD17O75179 2603 aaKnown RBP11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 CCL24O00175 119 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 TRBV12-3P01733 135 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BHQ93079 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 PRR25Q96S07 402 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BNQ99877 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 HIST1H2BMQ99879 126 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 BUB3O43684 328 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 TRGV2A0A075B6R0 118 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 APOHP02749 345 aaPredicted RBP11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 GSN-AS1Q9NRJ2 163 aa11.23□□□□□ -0.61
PDLIM2-201ENST00000265810 FLNBO75369 2602 aaKnown RBP11.22□□□□□ -0.61
PDLIM2-201ENST00000265810 OR10AG1Q8NH19 301 aa11.22□□□□□ -0.61
PDLIM2-201ENST00000265810 CBY1Q9Y3M2 126 aa11.22□□□□□ -0.61
PDLIM2-201ENST00000265810 SPINK13Q1W4C9 94 aa11.22□□□□□ -0.61
PDLIM2-201ENST00000265810 C12orf54Q6X4T0 127 aa11.22□□□□□ -0.61
PDLIM2-201ENST00000265810 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
PDLIM2-201ENST00000265810 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
PDLIM2-201ENST00000265810 DSPP15924 2871 aaKnown RBP11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 A0A087WW49 117 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 WI2-2373I1.2A0A1W2PRP0 233 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 CD5LO43866 347 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 SMIM12Q96EX1 92 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 VWC2LB2RUY7 222 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 F6UB75 175 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 ATP5L2Q7Z4Y8 100 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 FAM19A2Q8N3H0 131 aa11.21□□□□□ -0.61
PDLIM2-201ENST00000265810 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.62
PDLIM2-201ENST00000265810 G0S2P27469 103 aa11.21□□□□□ -0.62
PDLIM2-201ENST00000265810 FOXC2Q99958 501 aa11.21□□□□□ -0.62
PDLIM2-201ENST00000265810 IGF1P05019 195 aa11.21□□□□□ -0.62
PDLIM2-201ENST00000265810 Q8N6K4 173 aa11.21□□□□□ -0.62
PDLIM2-201ENST00000265810 PAM16Q9Y3D7 125 aa11.21□□□□□ -0.62
PDLIM2-201ENST00000265810 SERF1AO75920 110 aa11.2□□□□□ -0.62
PDLIM2-201ENST00000265810 TCTAP57738 103 aa11.2□□□□□ -0.62
PDLIM2-201ENST00000265810 CACNG7P62955 275 aa11.2□□□□□ -0.62
PDLIM2-201ENST00000265810 UNQ9165/PRO28630Q6UXU0 137 aa11.2□□□□□ -0.62
PDLIM2-201ENST00000265810 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
PDLIM2-201ENST00000265810 TNFRSF18Q9Y5U5 241 aa11.2□□□□□ -0.62
PDLIM2-201ENST00000265810 H7C1H1 209 aa11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 PFN1P07737 140 aaKnown RBP11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 TMEM86BQ8N661 226 aa11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 XCL2Q9UBD3 114 aa11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 SORL1Q92673 2214 aa11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 KNCNA6PVL3 124 aa11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 ZNF124Q15973 351 aa11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 ZNF492Q9P255 531 aa11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
PDLIM2-201ENST00000265810 C18orf15Q96N68 181 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 ZNF256Q9Y2P7 627 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 POLR3KQ9Y2Y1 108 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 INAFM1C9JVW0 142 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 ARMS2P0C7Q2 107 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 COL27A1Q8IZC6 1860 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 AGPAT4-IT1Q9H0P7 198 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 FRYLO94915 3013 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 EVI2AP22794 236 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 ZNF48Q96MX3 618 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 PPP1R17O96001 155 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 IGHG4P01861 327 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 MS4A6AQ9H2W1 248 aa11.18□□□□□ -0.62
PDLIM2-201ENST00000265810 NCR2O95944 276 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 V9GYV3 84 aa11.17□□□□□ -0.62
PDLIM2-201ENST00000265810 HTN3P15516 51 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms