RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 ARL3P36405 182 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 Q6ZWC4 215 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 RNF182Q8N6D2 247 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 SNHG12Q9BXW3 62 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 SAMD10Q9BYL1 202 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 M0QZK8 103 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 CT45A10P0DMU9 189 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 DEFB112Q30KQ8 113 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 LCNL1Q6ZST4 164 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 C18orf32Q8TCD1 76 aa12.98□□□□□ -0.33
CHKA-201ENST00000265689 PRAC2D3DTV9 90 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 IGHV3-11P01762 117 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 TDRG1Q3Y452 100 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 LBHQ53QV2 105 aaPredicted RBP12.97□□□□□ -0.33
CHKA-201ENST00000265689 A0A1W2PS18 150 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 SMAD7O15105 426 aaKnown RBP12.97□□□□□ -0.33
CHKA-201ENST00000265689 IGHV4-59P01825 116 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 PF4V1P10720 104 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 ARL6IP6Q8N6S5 226 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 PRR25Q96S07 402 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 ALKBH7Q9BT30 221 aaPredicted RBP12.97□□□□□ -0.33
CHKA-201ENST00000265689 U3KQE9 123 aa12.97□□□□□ -0.33
CHKA-201ENST00000265689 C1orf194Q5T5A4 169 aa12.96□□□□□ -0.33
CHKA-201ENST00000265689 SH2D1AO60880 128 aa12.96□□□□□ -0.34
CHKA-201ENST00000265689 FOXA3P55318 350 aaPredicted RBP12.96□□□□□ -0.34
CHKA-201ENST00000265689 ERCC8Q13216 396 aa12.96□□□□□ -0.34
CHKA-201ENST00000265689 KCNS1Q96KK3 526 aa12.96□□□□□ -0.34
CHKA-201ENST00000265689 ATP6V0BQ99437 205 aa12.96□□□□□ -0.34
CHKA-201ENST00000265689 GPX1P07203 203 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 NUTF2P61970 127 aaKnown RBP12.95□□□□□ -0.34
CHKA-201ENST00000265689 UNQ9165/PRO28630Q6UXU0 137 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 IL17RELQ6ZVW7 336 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 TMSB15BA0A087X1C1 80 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 TCAPO15273 167 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 ARMS2P0C7Q2 107 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 TMEM95Q3KNT9 176 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 SAPCD1Q5SSQ6 148 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 SIGLECL1Q8N7X8 197 aa12.95□□□□□ -0.34
CHKA-201ENST00000265689 KIR2DL5BA0A0G2JN68 375 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 KIR2DL5BA0A0G2JPC4 375 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 HAX1O00165 279 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 PMCHP20382 165 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 ZNF80P51504 273 aaPredicted RBP12.94□□□□□ -0.34
CHKA-201ENST00000265689 KIR2DL5AQ8N109 375 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 TPPP3Q9BW30 176 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 TRAV8-2A0A0B4J237 113 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 H3BUA1 57 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 AMTP48728 403 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 FAM162BQ5T6X4 162 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 USMG5Q96IX5 58 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 RNF114Q9Y508 228 aa12.94□□□□□ -0.34
CHKA-201ENST00000265689 ANK3Q12955 4377 aaKnown RBP12.94□□□□□ -0.34
CHKA-201ENST00000265689 KLF5Q13887 457 aaPredicted RBP12.93□□□□□ -0.34
CHKA-201ENST00000265689 COX8CQ7Z4L0 72 aa12.93□□□□□ -0.34
CHKA-201ENST00000265689 FAM19A2Q8N3H0 131 aa12.93□□□□□ -0.34
CHKA-201ENST00000265689 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.93□□□□□ -0.34
CHKA-201ENST00000265689 A0A1B0GUT8 65 aa12.93□□□□□ -0.34
CHKA-201ENST00000265689 TMEM189A5PLL7 270 aa12.93□□□□□ -0.34
CHKA-201ENST00000265689 J3QLI3 93 aa12.93□□□□□ -0.34
CHKA-201ENST00000265689 BRI3O95415 125 aa12.93□□□□□ -0.34
CHKA-201ENST00000265689 LOXL1Q08397 574 aaPredicted RBP12.93□□□□□ -0.34
CHKA-201ENST00000265689 C8orf86Q6ZUL3 223 aa12.93□□□□□ -0.34
CHKA-201ENST00000265689 OR4X2Q8NGF9 303 aa12.93□□□□□ -0.34
CHKA-201ENST00000265689 ZNF324O75467 553 aaPredicted RBP12.92□□□□□ -0.34
CHKA-201ENST00000265689 IGLV1-40P01703 118 aa12.92□□□□□ -0.34
CHKA-201ENST00000265689 IGHV4-31P0DP07 118 aa12.92□□□□□ -0.34
CHKA-201ENST00000265689 FBLL1A6NHQ2 334 aaKnown RBP12.92□□□□□ -0.34
CHKA-201ENST00000265689 G0S2P27469 103 aa12.92□□□□□ -0.34
CHKA-201ENST00000265689 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
CHKA-201ENST00000265689 SETXQ7Z333 2677 aaKnown RBP12.91□□□□□ -0.34
CHKA-201ENST00000265689 NDUFA4O00483 81 aa12.91□□□□□ -0.34
CHKA-201ENST00000265689 CFHR3Q02985 330 aa12.91□□□□□ -0.34
CHKA-201ENST00000265689 GLMPQ8WWB7 406 aa12.91□□□□□ -0.34
CHKA-201ENST00000265689 NRN1Q9NPD7 142 aa12.91□□□□□ -0.34
CHKA-201ENST00000265689 NTF3P20783 257 aa12.91□□□□□ -0.34
CHKA-201ENST00000265689 PAM16Q9Y3D7 125 aa12.91□□□□□ -0.34
CHKA-201ENST00000265689 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
CHKA-201ENST00000265689 M0R143 59 aa12.9□□□□□ -0.34
CHKA-201ENST00000265689 RIGQ13278 110 aa12.9□□□□□ -0.34
CHKA-201ENST00000265689 DUX5Q96PT3 197 aa12.9□□□□□ -0.34
CHKA-201ENST00000265689 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
CHKA-201ENST00000265689 KRTDAPP60985 99 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 RNASEKQ6P5S7 137 aaKnown RBP12.89□□□□□ -0.35
CHKA-201ENST00000265689 NIT1Q86X76 327 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 NDFIP1Q9BT67 221 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 AGPAT4-IT1Q9H0P7 198 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 BEX4Q9NWD9 120 aaPredicted RBP12.89□□□□□ -0.35
CHKA-201ENST00000265689 MUC21A0A0G2JKD1 596 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 MUC21A0A140T8X8 626 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 M0QZ24 198 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 RAB4AP20338 218 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 ZNF124Q15973 351 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 MUC21Q5SSG8 566 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 C10orf99Q6UWK7 81 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 URB1-AS1Q96HZ7 61 aa12.89□□□□□ -0.35
CHKA-201ENST00000265689 RBAKDNA6NC62 111 aa12.88□□□□□ -0.35
CHKA-201ENST00000265689 BMI1P35226 326 aa12.88□□□□□ -0.35
CHKA-201ENST00000265689 Q6AWC8 147 aa12.88□□□□□ -0.35
CHKA-201ENST00000265689 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms