RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PYGO2Q9BRQ0 406 aa13.63□□□□□ -0.23
SDF4-201ENST00000263741 SEPSECSQ9HD40 501 aaKnown RBP13.63□□□□□ -0.23
SDF4-201ENST00000263741 C11orf94C9JXX5 98 aa13.63□□□□□ -0.23
SDF4-201ENST00000263741 PAGE4O60829 102 aa13.63□□□□□ -0.23
SDF4-201ENST00000263741 FAM3BP58499 235 aaPredicted RBP13.63□□□□□ -0.23
SDF4-201ENST00000263741 FAM78BQ5VT40 261 aa13.63□□□□□ -0.23
SDF4-201ENST00000263741 A0A1W2PPV4 95 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 F6UZH7 168 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 H3BTX0 84 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 GATCO43716 136 aaKnown RBP13.62□□□□□ -0.23
SDF4-201ENST00000263741 PFN1P07737 140 aaKnown RBP13.62□□□□□ -0.23
SDF4-201ENST00000263741 FRMD6-AS1P0C7T7 363 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 DEFB131AP59861 70 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 MIR17HGQ75NE6 70 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 TXNDC17Q9BRA2 123 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 COL7A1Q02388 2944 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 FABP4P15090 132 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 PDZD11Q5EBL8 140 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 TMEM183AQ8IXX5 376 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
SDF4-201ENST00000263741 PHOX2AO14813 284 aa13.61□□□□□ -0.23
SDF4-201ENST00000263741 MRPS12O15235 138 aaKnown RBP13.61□□□□□ -0.23
SDF4-201ENST00000263741 PRB4P10163 310 aaPredicted RBP13.61□□□□□ -0.23
SDF4-201ENST00000263741 RPL7P18124 248 aaKnown RBP13.61□□□□□ -0.23
SDF4-201ENST00000263741 S100A7P31151 101 aa13.61□□□□□ -0.23
SDF4-201ENST00000263741 DEFB1P60022 68 aa13.61□□□□□ -0.23
SDF4-201ENST00000263741 IGFL4Q6B9Z1 124 aa13.61□□□□□ -0.23
SDF4-201ENST00000263741 PACRGQ96M98 296 aaPredicted RBP13.61□□□□□ -0.23
SDF4-201ENST00000263741 TRAV2A0A0B4J234 112 aa13.6□□□□□ -0.23
SDF4-201ENST00000263741 SOCS3O14543 225 aa13.6□□□□□ -0.23
SDF4-201ENST00000263741 PSMG4Q5JS54 123 aa13.6□□□□□ -0.23
SDF4-201ENST00000263741 GFI1BQ5VTD9 330 aa13.6□□□□□ -0.23
SDF4-201ENST00000263741 GPR82Q96P67 336 aa13.6□□□□□ -0.23
SDF4-201ENST00000263741 ASCL2Q99929 193 aa13.6□□□□□ -0.23
SDF4-201ENST00000263741 RBMY1BA6NDE4 496 aaKnown RBP13.59□□□□□ -0.23
SDF4-201ENST00000263741 RBMY1EA6NEQ0 496 aaKnown RBP13.59□□□□□ -0.23
SDF4-201ENST00000263741 RBMY1DP0C7P1 496 aaKnown RBP13.59□□□□□ -0.23
SDF4-201ENST00000263741 PYYP10082 97 aa13.59□□□□□ -0.23
SDF4-201ENST00000263741 S100A7AQ86SG5 101 aa13.59□□□□□ -0.23
SDF4-201ENST00000263741 SLC25A2Q9BXI2 301 aa13.59□□□□□ -0.23
SDF4-201ENST00000263741 A0A1W2PPQ1 181 aa13.59□□□□□ -0.23
SDF4-201ENST00000263741 TENM3Q9P273 2699 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 TYMSP04818 313 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 HLA-DMBP28068 263 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 CST9LP1Q5W188 147 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 NBEAL2Q6ZNJ1 2754 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 BPIFA4PQ86YQ2 179 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 RNF182Q8N6D2 247 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 C16orf92Q96LL3 132 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 C20orf173Q96LM9 149 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 HIST1H2BLQ99880 126 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 DNAH9Q9NYC9 4486 aa13.58□□□□□ -0.24
SDF4-201ENST00000263741 KNCNA6PVL3 124 aa13.57□□□□□ -0.24
SDF4-201ENST00000263741 TSTD3H0UI37 97 aa13.57□□□□□ -0.24
SDF4-201ENST00000263741 SLC17A3O00476 420 aa13.57□□□□□ -0.24
SDF4-201ENST00000263741 FAM167A-AS1Q96KT0 104 aa13.57□□□□□ -0.24
SDF4-201ENST00000263741 FUT9Q9Y231 359 aa13.57□□□□□ -0.24
SDF4-201ENST00000263741 CXorf1O96002 111 aa13.57□□□□□ -0.24
SDF4-201ENST00000263741 IGLC2P0DOY2 106 aa13.57□□□□□ -0.24
SDF4-201ENST00000263741 RPL35AP18077 110 aaKnown RBP13.57□□□□□ -0.24
SDF4-201ENST00000263741 COA6Q5JTJ3 125 aaKnown RBP13.57□□□□□ -0.24
SDF4-201ENST00000263741 IMMP2LQ96T52 175 aa13.57□□□□□ -0.24
SDF4-201ENST00000263741 TRAV8-2A0A0B4J237 113 aa13.56□□□□□ -0.24
SDF4-201ENST00000263741 XKRY2A2RUG3 117 aa13.56□□□□□ -0.24
SDF4-201ENST00000263741 OR10J4P0C629 311 aa13.56□□□□□ -0.24
SDF4-201ENST00000263741 PKIAP61925 76 aa13.56□□□□□ -0.24
SDF4-201ENST00000263741 SNRPD3P62318 126 aaKnown RBP13.56□□□□□ -0.24
SDF4-201ENST00000263741 MRPL32Q9BYC8 188 aaKnown RBP13.56□□□□□ -0.24
SDF4-201ENST00000263741 A0A087X0K7 114 aa13.55□□□□□ -0.24
SDF4-201ENST00000263741 ACTL10Q5JWF8 245 aa13.55□□□□□ -0.24
SDF4-201ENST00000263741 SBSPONQ8IVN8 264 aa13.55□□□□□ -0.24
SDF4-201ENST00000263741 ZNF586Q9NXT0 402 aa13.55□□□□□ -0.24
SDF4-201ENST00000263741 RHOBP62745 196 aa13.55□□□□□ -0.24
SDF4-201ENST00000263741 GDF5OSQ5U4N7 250 aa13.55□□□□□ -0.24
SDF4-201ENST00000263741 LINC01551Q86U37 167 aa13.55□□□□□ -0.24
SDF4-201ENST00000263741 FAM110AQ9BQ89 295 aa13.55□□□□□ -0.24
SDF4-201ENST00000263741 A8MZ25 164 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 F6UB75 175 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 ISLRO14498 428 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 OR7C2O60412 319 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 UBE2G2P60604 165 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 ANKRD39Q53RE8 183 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 ZNF503Q96F45 646 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 B9D2Q9BPU9 175 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 RNF24Q9Y225 148 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 STAG3L2P0CL84 134 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 STAG3L3P0CL85 134 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 BLNKQ8WV28 456 aa13.54□□□□□ -0.24
SDF4-201ENST00000263741 ARL14EPLP0DKL9 152 aa13.53□□□□□ -0.24
SDF4-201ENST00000263741 ID1P41134 155 aa13.53□□□□□ -0.24
SDF4-201ENST00000263741 ATP5G3P48201 142 aa13.53□□□□□ -0.24
SDF4-201ENST00000263741 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
SDF4-201ENST00000263741 NDUFB4O95168 129 aa13.52□□□□□ -0.24
SDF4-201ENST00000263741 LINC00322Q6ZN03 302 aaPredicted RBP13.52□□□□□ -0.24
SDF4-201ENST00000263741 PAXXQ9BUH6 204 aa13.52□□□□□ -0.24
SDF4-201ENST00000263741 TMEM14CQ9P0S9 112 aa13.52□□□□□ -0.24
SDF4-201ENST00000263741 LOC102724200A0A096LPH7 203 aaPredicted RBP13.52□□□□□ -0.25
SDF4-201ENST00000263741 AMBPP02760 352 aa13.52□□□□□ -0.25
SDF4-201ENST00000263741 CMC4P56277 68 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms