RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PRR31Q5SQ13 230 aa7.23□□□□□ -1.25
SNRNP40-201ENST00000263694 OR8A1Q8NGG7 326 aa7.23□□□□□ -1.25
SNRNP40-201ENST00000263694 MRPL53Q96EL3 112 aaKnown RBP7.23□□□□□ -1.25
SNRNP40-201ENST00000263694 TVP23CQ96ET8 276 aa7.23□□□□□ -1.25
SNRNP40-201ENST00000263694 GPR61Q9BZJ8 451 aa7.23□□□□□ -1.25
SNRNP40-201ENST00000263694 G3V4G9 280 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 KRTAP10-11P60412 298 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 UBE2G1P62253 170 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 FLI1Q01543 452 aaPredicted RBP7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 TMEM183BQ1AE95 376 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 ACTL10Q5JWF8 245 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 SAMD13Q5VXD3 122 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 IGF2BP2-AS1Q96M15 143 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 C8orf49Q96NF6 230 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 CLEC5AQ9NY25 188 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 PSG8Q9UQ74 426 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 KLF12Q9Y4X4 402 aa7.22□□□□□ -1.25
SNRNP40-201ENST00000263694 NOTCH1P46531 2555 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 A0A0J9YX75 114 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 J3KRW8 73 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 IGLV2-8P01709 118 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 CT45A10P0DMU9 189 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 CENPWQ5EE01 88 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 TMEM75Q8N9X5 138 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 OR4B1Q8NGF8 309 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 OR10J6PQ8NGY7 276 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 OCC1Q8TAD7 63 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 PRR25Q96S07 402 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 TCEAL7Q9BRU2 100 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 SAV1Q9H4B6 383 aaPredicted RBP7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 C19orf73Q9NVV2 129 aa7.21□□□□□ -1.25
SNRNP40-201ENST00000263694 MGAM2Q2M2H8 2515 aa7.21□□□□□ -1.26
SNRNP40-201ENST00000263694 OR11H12B2RN74 326 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 NPIPB6E9PJ23 425 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 K7EQM0 130 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 NDUFS6O75380 124 aaKnown RBP7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 GNG4P50150 75 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 FXYD7P58549 80 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 OR5I1Q13606 314 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 KIR3DS1Q14943 382 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 C10orf91Q5T1B1 145 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 EBLN2Q6P2I7 272 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 C9orf47Q6ZRZ4 202 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 Q86TA4 180 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 BAGE2Q86Y30 109 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 DEFB125Q8N687 156 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 ARL6IP6Q8N6S5 226 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 FMC1Q96HJ9 113 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 SEC11CQ9BY50 192 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 RBAKDNA6NC62 111 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 K7EN84 100 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 LTAP01374 205 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 APOC3P02656 99 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 MGST1P10620 155 aaKnown RBP7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 TAS2R60P59551 318 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 TMEM241Q24JQ0 296 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 C4orf48Q5BLP8 95 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 TMEM78Q5T7P6 136 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 FOXI2Q6ZQN5 318 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 Q6ZQT7 251 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 SDF2L1Q9HCN8 221 aa7.2□□□□□ -1.26
SNRNP40-201ENST00000263694 SERTM2A0A1B0GWG4 89 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 RBMY1BA6NDE4 496 aaKnown RBP7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 RBMY1EA6NEQ0 496 aaKnown RBP7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 KRBOX1C9JBD0 128 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 H3BMM0 161 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 RBMY1DP0C7P1 496 aaKnown RBP7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 ZNF138P52744 262 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 RPL23P62829 140 aaKnown RBP7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 ADIRFQ15847 76 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 FAM74A3Q4VXF1 159 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 PRR9Q5T870 116 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 LINC00322Q6ZN03 302 aaPredicted RBP7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 Q8N1Y9 231 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 ZC2HC1AQ96GY0 325 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 LINC00477Q96M19 166 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 NIPSNAP3BQ9BS92 247 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 ZNF492Q9P255 531 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 NAT8Q9UHE5 227 aa7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 CARHSP1Q9Y2V2 147 aaKnown RBP7.19□□□□□ -1.26
SNRNP40-201ENST00000263694 NBEAL1Q6ZS30 2694 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 C9JCJ5 164 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 M0R2Z0 102 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 S100A9P06702 114 aaKnown RBP7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 HLA-DRB4P13762 266 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 RPL35AP18077 110 aaKnown RBP7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 ZNF80P51504 273 aaPredicted RBP7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 PRR27Q6MZM9 219 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 AMTNQ6UX39 209 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 LINC01551Q86U37 167 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 MLST8Q9BVC4 326 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 HLA-DRB4X5D2U9 266 aa7.18□□□□□ -1.26
SNRNP40-201ENST00000263694 TRAV12-2A0A075B6T6 113 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 TRBV6-1A0A0K0K1D8 114 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 M0R036 132 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 PRB2P02812 416 aaPredicted RBP7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 CRIP1P50238 77 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 SPINK13Q1W4C9 94 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 KRTAP21-3Q3LHN1 58 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 SAMD5Q5TGI4 173 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms