RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 RITA1Q96K30 269 aa11.29□□□□□ -0.6
SCARF1-201ENST00000263071 ZNF71Q9NQZ8 489 aaPredicted RBP11.29□□□□□ -0.6
SCARF1-201ENST00000263071 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
SCARF1-201ENST00000263071 SPRY4Q9C004 299 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 TMEM14BQ9NUH8 114 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PRR20EP86478 221 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PRR20CP86479 221 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PRR20DP86480 221 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PRR20BP86481 221 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PRR20AP86496 221 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 MZT1Q08AG7 82 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 RASL11BQ9BPW5 248 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 LOC107984640A0A0U1RRK4 108 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 A8MWV9 139 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PEX7O00628 323 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 RUSC1-AS1Q66K80 236 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PRR7Q8TB68 274 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PIMREGQ9BSJ6 248 aa11.28□□□□□ -0.6
SCARF1-201ENST00000263071 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.63e-6■□□□□ 10.1
SCARF1-201ENST00000263071 AGRNO00468 2067 aa11.27□□□□□ -0.6
SCARF1-201ENST00000263071 LINC00694P0DN24 101 aa11.27□□□□□ -0.6
SCARF1-201ENST00000263071 CNTFRP26992 372 aa11.27□□□□□ -0.6
SCARF1-201ENST00000263071 EXOC3-AS1Q8N2X6 119 aa11.27□□□□□ -0.6
SCARF1-201ENST00000263071 DNAJC30Q96LL9 226 aa11.27□□□□□ -0.6
SCARF1-201ENST00000263071 RPP21Q9H633 154 aaKnown RBP11.27□□□□□ -0.6
SCARF1-201ENST00000263071 DYNLRB1Q9NP97 96 aa11.27□□□□□ -0.6
SCARF1-201ENST00000263071 IGHV1-46P01743 117 aa11.27□□□□□ -0.61
SCARF1-201ENST00000263071 PRCDQ00LT1 54 aa11.27□□□□□ -0.61
SCARF1-201ENST00000263071 RBPMS2Q6ZRY4 209 aaKnown RBP11.27□□□□□ -0.61
SCARF1-201ENST00000263071 CIARTQ8N365 385 aaPredicted RBP11.27□□□□□ -0.61
SCARF1-201ENST00000263071 DKK2Q9UBU2 259 aa11.27□□□□□ -0.61
SCARF1-201ENST00000263071 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
SCARF1-201ENST00000263071 COL8A1P27658 744 aa11.26□□□□□ -0.61
SCARF1-201ENST00000263071 WT1-ASQ06250 92 aa11.26□□□□□ -0.61
SCARF1-201ENST00000263071 CD69Q07108 199 aa11.26□□□□□ -0.61
SCARF1-201ENST00000263071 CARD19Q96LW7 228 aa11.26□□□□□ -0.61
SCARF1-201ENST00000263071 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
SCARF1-201ENST00000263071 LYPD2Q6UXB3 125 aa11.26□□□□□ -0.61
SCARF1-201ENST00000263071 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
SCARF1-201ENST00000263071 IFI27P40305 119 aaPredicted RBP11.26□□□□□ -0.61
SCARF1-201ENST00000263071 GOLT1AQ6ZVE7 132 aa11.26□□□□□ -0.61
SCARF1-201ENST00000263071 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
SCARF1-201ENST00000263071 SLC25A2Q9BXI2 301 aa11.26□□□□□ -0.61
SCARF1-201ENST00000263071 FOXA2Q9Y261 457 aaPredicted RBP11.26□□□□□ -0.61
SCARF1-201ENST00000263071 C16orf97H3BN30 126 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 HOXA3O43365 443 aaPredicted RBP11.25□□□□□ -0.61
SCARF1-201ENST00000263071 PRSS1P07477 247 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 HES1Q14469 280 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 GTSCR1Q86UQ5 136 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 OR13C6PQ8NH95 151 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 SLC25A15Q9Y619 301 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 CUL9Q8IWT3 2517 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 IGKV2D-26A0A0A0MRZ7 120 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 K7EM74 188 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
SCARF1-201ENST00000263071 MUC6Q6W4X9 2439 aa11.24□□□□□ -0.61
SCARF1-201ENST00000263071 GAFA1Q96PS6 74 aa11.24□□□□□ -0.61
SCARF1-201ENST00000263071 FAM106CPP0CH98 169 aa11.24□□□□□ -0.61
SCARF1-201ENST00000263071 FAM106AQ4KMX7 169 aa11.24□□□□□ -0.61
SCARF1-201ENST00000263071 KLF17Q5JT82 389 aaPredicted RBP11.24□□□□□ -0.61
SCARF1-201ENST00000263071 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
SCARF1-201ENST00000263071 RPEQ96AT9 228 aa11.24□□□□□ -0.61
SCARF1-201ENST00000263071 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
SCARF1-201ENST00000263071 DLL1O00548 723 aa11.23□□□□□ -0.61
SCARF1-201ENST00000263071 IGHV3-23P01764 117 aa11.23□□□□□ -0.61
SCARF1-201ENST00000263071 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
SCARF1-201ENST00000263071 ZNF714Q96N38 554 aa11.23□□□□□ -0.61
SCARF1-201ENST00000263071 DKK4Q9UBT3 224 aa11.23□□□□□ -0.61
SCARF1-201ENST00000263071 LYRM7Q5U5X0 104 aa11.23□□□□□ -0.61
SCARF1-201ENST00000263071 HBDP02042 147 aa11.23□□□□□ -0.61
SCARF1-201ENST00000263071 LOXL1Q08397 574 aaPredicted RBP11.23□□□□□ -0.61
SCARF1-201ENST00000263071 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
SCARF1-201ENST00000263071 PATE2Q6UY27 113 aa11.23□□□□□ -0.61
SCARF1-201ENST00000263071 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
SCARF1-201ENST00000263071 TRGV8A0A0C4DH27 118 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 CRLF1O75462 422 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 LY6HO94772 140 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 SCGB1C2P0DMR2 95 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 Q6ZS92 163 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 SEM1Q6ZVN7 128 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 SRSF12Q8WXF0 261 aaKnown RBP11.22□□□□□ -0.61
SCARF1-201ENST00000263071 RPUSD1Q9UJJ7 312 aaKnown RBP11.22□□□□□ -0.61
SCARF1-201ENST00000263071 WIPF1O43516 503 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 POU2AF1Q16633 256 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 Q6ZQT7 251 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 C10orf126Q8N4M7 172 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 NDUFB3O43676 98 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 SUB1P53999 127 aaKnown RBP eCLIP11.22□□□□□ -0.61
SCARF1-201ENST00000263071 ZNF329Q86UD4 541 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 CHD8Q9HCK8 2581 aa11.22□□□□□ -0.61
SCARF1-201ENST00000263071 F5H768 121 aa11.21□□□□□ -0.61
SCARF1-201ENST00000263071 TMEM200BQ69YZ2 307 aa11.21□□□□□ -0.61
SCARF1-201ENST00000263071 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
SCARF1-201ENST00000263071 C9JAW5 83 aa11.21□□□□□ -0.62
SCARF1-201ENST00000263071 EPDR1Q9UM22 224 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms