RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SMIM12Q96EX1 92 aa8.02□□□□□ -1.12
PALB2-201ENST00000261584 LINC00477Q96M19 166 aa8.02□□□□□ -1.12
PALB2-201ENST00000261584 LTAP01374 205 aa8.02□□□□□ -1.13
PALB2-201ENST00000261584 PF4V1P10720 104 aa8.02□□□□□ -1.13
PALB2-201ENST00000261584 LOXP28300 417 aaPredicted RBP8.02□□□□□ -1.13
PALB2-201ENST00000261584 EIF4EBP1Q13541 118 aaPredicted RBP8.02□□□□□ -1.13
PALB2-201ENST00000261584 ZNF479Q96JC4 524 aa8.02□□□□□ -1.13
PALB2-201ENST00000261584 ZNF747Q9BV97 191 aa8.02□□□□□ -1.13
PALB2-201ENST00000261584 TNRC6AQ8NDV7 1962 aaKnown RBP8.02□□□□□ -1.13
PALB2-201ENST00000261584 ADAMTSL5Q6ZMM2 481 aa8.02□□□□□ -1.13
PALB2-201ENST00000261584 ARPC1AQ92747 370 aa8.02□□□□□ -1.13
PALB2-201ENST00000261584 SCGB3A1Q96QR1 104 aa8.02□□□□□ -1.13
PALB2-201ENST00000261584 TNRC18O15417 2968 aaPredicted RBP8.02□□□□□ -1.13
PALB2-201ENST00000261584 G3V318 75 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 NBR2O15453 112 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 NEU4Q8WWR8 484 aaPredicted RBP8.01□□□□□ -1.13
PALB2-201ENST00000261584 MBD6Q96DN6 1003 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 HIVEP2P31629 2446 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 TMEM8BA6NDV4 472 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 SMAD7O15105 426 aaKnown RBP8.01□□□□□ -1.13
PALB2-201ENST00000261584 NDUFS7O75251 213 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 TTC9CQ8N5M4 171 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 C14orf178Q8N769 122 aaPredicted RBP8.01□□□□□ -1.13
PALB2-201ENST00000261584 IGLC1P0CG04 106 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 C15orf32Q32M92 178 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 TSSC4Q9Y5U2 329 aaPredicted RBP8.01□□□□□ -1.13
PALB2-201ENST00000261584 MTORP42345 2549 aa8.01□□□□□ -1.13
PALB2-201ENST00000261584 IGKV1D-37A0A075B6S9 117 aa8□□□□□ -1.13
PALB2-201ENST00000261584 TMEM265A0A087WTH1 108 aa8□□□□□ -1.13
PALB2-201ENST00000261584 TEX48A0A1B0GUV7 120 aa8□□□□□ -1.13
PALB2-201ENST00000261584 RNASE4P34096 147 aaKnown RBP8□□□□□ -1.13
PALB2-201ENST00000261584 TMEM249Q2WGJ8 235 aa8□□□□□ -1.13
PALB2-201ENST00000261584 IL17RELQ6ZVW7 336 aa8□□□□□ -1.13
PALB2-201ENST00000261584 ASCL5Q7RTU5 278 aa8□□□□□ -1.13
PALB2-201ENST00000261584 DEFB125Q8N687 156 aa8□□□□□ -1.13
PALB2-201ENST00000261584 TRGV9Q99603 122 aa8□□□□□ -1.13
PALB2-201ENST00000261584 NAV2Q8IVL1 2488 aa8□□□□□ -1.13
PALB2-201ENST00000261584 JMJD1CQ15652 2540 aa8□□□□□ -1.13
PALB2-201ENST00000261584 E7EQL1 145 aa8□□□□□ -1.13
PALB2-201ENST00000261584 GAS8-AS1O95177 125 aa8□□□□□ -1.13
PALB2-201ENST00000261584 IGLV1-44P01699 117 aa8□□□□□ -1.13
PALB2-201ENST00000261584 COX8AP10176 69 aa8□□□□□ -1.13
PALB2-201ENST00000261584 ANXA2RQ3ZCQ2 193 aa8□□□□□ -1.13
PALB2-201ENST00000261584 RAB1BQ9H0U4 201 aa8□□□□□ -1.13
PALB2-201ENST00000261584 TRBV19A0A075B6N1 114 aa8□□□□□ -1.13
PALB2-201ENST00000261584 BUB1B-PAK6H3BSN5 160 aa8□□□□□ -1.13
PALB2-201ENST00000261584 IGKCP01834 107 aa8□□□□□ -1.13
PALB2-201ENST00000261584 IGHG3P01860 377 aa8□□□□□ -1.13
PALB2-201ENST00000261584 EGR2P11161 476 aaPredicted RBP8□□□□□ -1.13
PALB2-201ENST00000261584 CHAC1Q9BUX1 264 aa8□□□□□ -1.13
PALB2-201ENST00000261584 FABP5P3A8MUU1 101 aa8□□□□□ -1.13
PALB2-201ENST00000261584 FXYD2P54710 66 aa8□□□□□ -1.13
PALB2-201ENST00000261584 HSD52Q0P140 79 aa8□□□□□ -1.13
PALB2-201ENST00000261584 ZNF833PQ6ZTB9 187 aa8□□□□□ -1.13
PALB2-201ENST00000261584 MRPL35Q9NZE8 188 aaKnown RBP8□□□□□ -1.13
PALB2-201ENST00000261584 CEP192Q8TEP8 1941 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 C10orf142B7Z368 130 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 IGKV1-17P01599 117 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 ABCA12Q86UK0 2595 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 IGHV3-73A0A0B4J1V6 119 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 BRD3OSQ6XYD6 125 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 CHODLQ9H9P2 273 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 ITGB1BP1O14713 200 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 TNFRSF6BO95407 300 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 CDKN1BP46527 198 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 SEC11AP67812 179 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 ZNF672Q499Z4 452 aaPredicted RBP7.99□□□□□ -1.13
PALB2-201ENST00000261584 RAXQ9Y2V3 346 aa7.99□□□□□ -1.13
PALB2-201ENST00000261584 DPM2O94777 84 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 ESDP10768 282 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 FAM104BQ5XKR9 115 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 FAM231DQ6ZW35 169 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 FAM57AQ8TBR7 257 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 MS4A6AQ9H2W1 248 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 LRRK2Q5S007 2527 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 GP9P14770 177 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 APOBEC3AP31941 199 aaPredicted RBP7.98□□□□□ -1.13
PALB2-201ENST00000261584 WFDC2Q14508 124 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 URB1-AS1Q96HZ7 61 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 SOX21Q9Y651 276 aaPredicted RBP7.98□□□□□ -1.13
PALB2-201ENST00000261584 IGHV3OR16-12A0A075B7B8 117 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 A0A087WWL8 130 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 PRAC2D3DTV9 90 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 ATP5IP56385 69 aaPredicted RBP7.98□□□□□ -1.13
PALB2-201ENST00000261584 PAX2Q02962 417 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 TEX36Q5VZQ5 186 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 RAX2Q96IS3 184 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 SCRT2Q9NQ03 307 aa7.98□□□□□ -1.13
PALB2-201ENST00000261584 ZNF815PA8K554 130 aa7.97□□□□□ -1.13
PALB2-201ENST00000261584 F6UB75 175 aa7.97□□□□□ -1.13
PALB2-201ENST00000261584 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.97□□□□□ -1.13
PALB2-201ENST00000261584 PRTN3P24158 256 aa7.97□□□□□ -1.13
PALB2-201ENST00000261584 WIPF2Q8TF74 440 aaPredicted RBP7.97□□□□□ -1.13
PALB2-201ENST00000261584 METTL26Q96S19 204 aa7.97□□□□□ -1.13
PALB2-201ENST00000261584 LRBAP50851 2863 aa7.97□□□□□ -1.13
PALB2-201ENST00000261584 MBD3L4A6NDZ8 208 aaPredicted RBP7.97□□□□□ -1.13
PALB2-201ENST00000261584 MBD3L3A6NE82 208 aaPredicted RBP7.97□□□□□ -1.13
PALB2-201ENST00000261584 MBD3L5A6NJ08 208 aaPredicted RBP7.97□□□□□ -1.13
PALB2-201ENST00000261584 RASL11AQ6T310 242 aa7.97□□□□□ -1.13
PALB2-201ENST00000261584 MBD3L2Q8NHZ7 208 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms