RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 LYNX1G3V0Z9 82 aa13.87□□□□□ -0.19
KLF3-201ENST00000261438 TMEM178BH3BS89 294 aa13.87□□□□□ -0.19
KLF3-201ENST00000261438 LYNX1P0DP58 116 aa13.87□□□□□ -0.19
KLF3-201ENST00000261438 TIMM21Q9BVV7 248 aa13.87□□□□□ -0.19
KLF3-201ENST00000261438 TP53TG3Q9ULZ0 132 aa13.87□□□□□ -0.19
KLF3-201ENST00000261438 NEGR1Q7Z3B1 354 aa13.86□□□□□ -0.19
KLF3-201ENST00000261438 LINC01560Q8TB33 94 aa13.86□□□□□ -0.19
KLF3-201ENST00000261438 SPXQ9BT56 116 aa13.86□□□□□ -0.19
KLF3-201ENST00000261438 PAX8Q06710 450 aa13.86□□□□□ -0.19
KLF3-201ENST00000261438 GAGE2AQ6NT46 116 aa13.86□□□□□ -0.19
KLF3-201ENST00000261438 ZNF833PQ6ZTB9 187 aa13.86□□□□□ -0.19
KLF3-201ENST00000261438 LINC00477Q96M19 166 aa13.86□□□□□ -0.19
KLF3-201ENST00000261438 HLA-DMBP28068 263 aa13.86□□□□□ -0.19
KLF3-201ENST00000261438 PMVKQ15126 192 aa13.85□□□□□ -0.19
KLF3-201ENST00000261438 RNASE6Q93091 150 aaKnown RBP13.85□□□□□ -0.19
KLF3-201ENST00000261438 KIAA1671Q9BY89 1806 aa13.85□□□□□ -0.19
KLF3-201ENST00000261438 C9orf139Q6ZV77 190 aa13.85□□□□□ -0.19
KLF3-201ENST00000261438 PRSS29PA6NIE9 313 aa13.85□□□□□ -0.19
KLF3-201ENST00000261438 BUB1B-PAK6H3BSN5 160 aa13.85□□□□□ -0.19
KLF3-201ENST00000261438 K7EMI3 77 aa13.85□□□□□ -0.19
KLF3-201ENST00000261438 C5orf64Q2M2E5 130 aa13.85□□□□□ -0.19
KLF3-201ENST00000261438 GTSF1Q8WW33 167 aa13.84□□□□□ -0.19
KLF3-201ENST00000261438 HIGD1BQ9P298 99 aa13.84□□□□□ -0.19
KLF3-201ENST00000261438 MORN5Q5VZ52 161 aa13.84□□□□□ -0.19
KLF3-201ENST00000261438 YLPM1P49750 1951 aaKnown RBP13.84□□□□□ -0.19
KLF3-201ENST00000261438 TTTY13Q9BZ97 58 aa13.84□□□□□ -0.19
KLF3-201ENST00000261438 K7EM74 188 aa13.84□□□□□ -0.19
KLF3-201ENST00000261438 KLRD1Q13241 179 aa13.84□□□□□ -0.19
KLF3-201ENST00000261438 SMIM2Q9BVW6 85 aa13.84□□□□□ -0.19
KLF3-201ENST00000261438 ZNF407Q9C0G0 2248 aa13.84□□□□□ -0.19
KLF3-201ENST00000261438 H3BRN7 92 aa13.83□□□□□ -0.19
KLF3-201ENST00000261438 FOXI1Q12951 378 aa13.83□□□□□ -0.19
KLF3-201ENST00000261438 TRIOBPQ9H2D6 2365 aa13.83□□□□□ -0.19
KLF3-201ENST00000261438 SHISA9B4DS77 424 aa13.83□□□□□ -0.2
KLF3-201ENST00000261438 IGLV2-14P01704 120 aa13.83□□□□□ -0.2
KLF3-201ENST00000261438 IL17RELQ6ZVW7 336 aa13.83□□□□□ -0.2
KLF3-201ENST00000261438 SRD5A1P18405 259 aa13.83□□□□□ -0.2
KLF3-201ENST00000261438 COL4A6Q14031 1691 aa13.83□□□□□ -0.2
KLF3-201ENST00000261438 TMEM141Q96I45 108 aa13.82□□□□□ -0.2
KLF3-201ENST00000261438 SPANXDQ9BXN6 97 aa13.82□□□□□ -0.2
KLF3-201ENST00000261438 FAM57AQ8TBR7 257 aa13.82□□□□□ -0.2
KLF3-201ENST00000261438 NEU4Q8WWR8 484 aaPredicted RBP13.82□□□□□ -0.2
KLF3-201ENST00000261438 TP73-AS1Q9UF72 201 aa13.82□□□□□ -0.2
KLF3-201ENST00000261438 NDPQ00604 133 aa13.82□□□□□ -0.2
KLF3-201ENST00000261438 ZNF295-AS1Q8N0V1 137 aa13.82□□□□□ -0.2
KLF3-201ENST00000261438 A0A087WWL8 130 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 PRSS47A8MTI9 375 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 DUX4L9Q6RFH8 374 aaPredicted RBP13.81□□□□□ -0.2
KLF3-201ENST00000261438 TEN1Q86WV5 123 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 DTX1Q86Y01 620 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 KRTAP27-1Q3LI81 207 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 TPSG1Q9NRR2 321 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 DOCK10Q96BY6 2186 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 LYPD2Q6UXB3 125 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 FAM167A-AS1Q96KT0 104 aa13.81□□□□□ -0.2
KLF3-201ENST00000261438 LY6G5BQ8NDX9 201 aa13.8□□□□□ -0.2
KLF3-201ENST00000261438 CRPP02741 224 aa13.8□□□□□ -0.2
KLF3-201ENST00000261438 C17orf77Q96MU5 243 aa13.8□□□□□ -0.2
KLF3-201ENST00000261438 MDS2Q8NDY4 140 aa13.8□□□□□ -0.2
KLF3-201ENST00000261438 TRGV11A0A075B6L2 103 aa13.8□□□□□ -0.2
KLF3-201ENST00000261438 LINC01587Q99440 93 aa13.8□□□□□ -0.2
KLF3-201ENST00000261438 EP300Q09472 2414 aaPredicted RBP13.8□□□□□ -0.2
KLF3-201ENST00000261438 C11orf68Q9H3H3 251 aaKnown RBP13.79□□□□□ -0.2
KLF3-201ENST00000261438 PATE2Q6UY27 113 aa13.79□□□□□ -0.2
KLF3-201ENST00000261438 GATD1Q8NB37 220 aa13.79□□□□□ -0.2
KLF3-201ENST00000261438 ZNF883P0CG24 379 aa13.79□□□□□ -0.2
KLF3-201ENST00000261438 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
KLF3-201ENST00000261438 PKDREJQ9NTG1 2253 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 NCOR1O75376 2440 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 INAFM2P0DMQ5 153 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 CARD19Q96LW7 228 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 J3QQQ9 107 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 DUSP14O95147 198 aaKnown RBP13.78□□□□□ -0.2
KLF3-201ENST00000261438 CFC1BP0CG36 223 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 CFC1P0CG37 223 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 TMEM105Q8N8V8 129 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 KMT2EQ8IZD2 1858 aa13.78□□□□□ -0.2
KLF3-201ENST00000261438 LINC00158P58513 81 aa13.77□□□□□ -0.2
KLF3-201ENST00000261438 S100A7L2Q5SY68 101 aa13.77□□□□□ -0.21
KLF3-201ENST00000261438 LINC00527Q9UJ94 153 aa13.77□□□□□ -0.21
KLF3-201ENST00000261438 GATA1P15976 413 aaPredicted RBP13.77□□□□□ -0.21
KLF3-201ENST00000261438 Q6ZPA2 131 aa13.77□□□□□ -0.21
KLF3-201ENST00000261438 RNF138Q8WVD3 245 aa13.77□□□□□ -0.21
KLF3-201ENST00000261438 CACNA1GO43497 2377 aa13.77□□□□□ -0.21
KLF3-201ENST00000261438 C3orf36Q3SXR2 165 aa13.76□□□□□ -0.21
KLF3-201ENST00000261438 TCTEX1D4Q5JR98 221 aa13.76□□□□□ -0.21
KLF3-201ENST00000261438 USF3Q68DE3 2245 aa13.76□□□□□ -0.21
KLF3-201ENST00000261438 IGHV3-73A0A0B4J1V6 119 aa13.76□□□□□ -0.21
KLF3-201ENST00000261438 RASL10AQ92737 203 aa13.76□□□□□ -0.21
KLF3-201ENST00000261438 GP9P14770 177 aa13.76□□□□□ -0.21
KLF3-201ENST00000261438 ANKRD29Q8N6D5 301 aa13.76□□□□□ -0.21
KLF3-201ENST00000261438 RNF114Q9Y508 228 aa13.76□□□□□ -0.21
KLF3-201ENST00000261438 TRACP01848 142 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 GDF5OSQ5U4N7 250 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 C11orf53Q8IXP5 236 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 OVOL2Q9BRP0 275 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 IGKV1OR2-108A0A075B7D4 117 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 GATA4P43694 442 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 CRIP3Q6Q6R5 217 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 THSD7BQ9C0I4 1608 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms