RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.87
COL8A1-201ENST00000261037 OVOL2Q9BRP0 275 aa9.65□□□□□ -0.87
COL8A1-201ENST00000261037 MRAPQ8TCY5 172 aa9.64□□□□□ -0.87
COL8A1-201ENST00000261037 ZNF134P52741 427 aa9.64□□□□□ -0.87
COL8A1-201ENST00000261037 FAM104BQ5XKR9 115 aa9.64□□□□□ -0.87
COL8A1-201ENST00000261037 C18orf32Q8TCD1 76 aa9.64□□□□□ -0.87
COL8A1-201ENST00000261037 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
COL8A1-201ENST00000261037 SDK2Q58EX2 2172 aa9.64□□□□□ -0.87
COL8A1-201ENST00000261037 NDUFS6O75380 124 aaKnown RBP9.63□□□□□ -0.87
COL8A1-201ENST00000261037 LMO1P25800 156 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 IGF2BP2-AS1Q96M15 143 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 IGLV3-9A0A075B6K5 115 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 EREGO14944 169 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 FRMPD3Q5JV73 1810 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 SDHAF1A6NFY7 115 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 WT1-ASQ06250 92 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 DNAJC30Q96LL9 226 aa9.63□□□□□ -0.87
COL8A1-201ENST00000261037 NDUFA4O00483 81 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 HLA-DRB4P13762 266 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 CDKN1BP46527 198 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 ZNF124Q15973 351 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 ZC2HC1AQ96GY0 325 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 HLA-DRB4X5D2U9 266 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 ZNF318Q5VUA4 2279 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 SLAQ13239 276 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 TMEM243Q9BU79 118 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 EP300Q09472 2414 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-201ENST00000261037 FER1L5A0AVI2 2057 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 YLPM1P49750 1951 aaKnown RBP9.62□□□□□ -0.87
COL8A1-201ENST00000261037 C15orf65H3BRN8 121 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 HOXB4P17483 251 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-201ENST00000261037 HLA-DMBP28068 263 aa9.62□□□□□ -0.87
COL8A1-201ENST00000261037 CNOT1A5YKK6 2376 aaKnown RBP9.62□□□□□ -0.87
COL8A1-201ENST00000261037 IGHV1-24A0A0C4DH33 117 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 WIPF3A6NGB9 483 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 ATP6V0BQ99437 205 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 A0A0J9YY99 117 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 RHODO00212 210 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 GRNP28799 593 aaKnown RBP9.61□□□□□ -0.87
COL8A1-201ENST00000261037 APOC4P55056 127 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 MORN5Q5VZ52 161 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 C17orf77Q96MU5 243 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 PRR25Q96S07 402 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 FAM231BA6NCW3 169 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 F6UB75 175 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 UBE2V1Q13404 147 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 LRRK1Q38SD2 2015 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 CGB7P0DN87 165 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 FAM215AQ9Y5M1 114 aa9.61□□□□□ -0.87
COL8A1-201ENST00000261037 H3BMM0 161 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 J3QKU1 62 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 PLXNA4Q9HCM2 1894 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 SPRY2O43597 315 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 NDUFS7O75251 213 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 Q0VG73 95 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 VWC2Q2TAL6 325 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 V9GYV3 84 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 IGFL3Q6UXB1 125 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 MYLKQ15746 1914 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 PRSS29PA6NIE9 313 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 CD5LO43866 347 aa9.6□□□□□ -0.87
COL8A1-201ENST00000261037 IGHV7-4-1A0A0J9YVY3 117 aa9.59□□□□□ -0.87
COL8A1-201ENST00000261037 NPYP01303 97 aa9.59□□□□□ -0.87
COL8A1-201ENST00000261037 SPRNQ5BIV9 151 aa9.59□□□□□ -0.87
COL8A1-201ENST00000261037 IGLV2-23P01705 113 aa9.59□□□□□ -0.87
COL8A1-201ENST00000261037 SCRT2Q9NQ03 307 aa9.59□□□□□ -0.87
COL8A1-201ENST00000261037 ANAPC1Q9H1A4 1944 aa9.59□□□□□ -0.87
COL8A1-201ENST00000261037 SMIM27A0A1W2PRY6 76 aa9.59□□□□□ -0.87
COL8A1-201ENST00000261037 RBMY1FQ15415 496 aaKnown RBP9.59□□□□□ -0.87
COL8A1-201ENST00000261037 C1orf147Q96MC9 270 aaPredicted RBP9.59□□□□□ -0.87
COL8A1-201ENST00000261037 ANGP03950 147 aaKnown RBP9.59□□□□□ -0.87
COL8A1-201ENST00000261037 SIGLEC8Q9NYZ4 499 aa9.59□□□□□ -0.87
COL8A1-201ENST00000261037 MED12Q93074 2177 aa9.59□□□□□ -0.88
COL8A1-201ENST00000261037 NOP10Q9NPE3 64 aaKnown RBP9.58□□□□□ -0.88
COL8A1-201ENST00000261037 PHF3Q92576 2039 aaKnown RBP9.58□□□□□ -0.88
COL8A1-201ENST00000261037 GNRH2O43555 120 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 IGHV4-59P01825 116 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 Q6ZQT7 251 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 COX11Q9Y6N1 276 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 PI4KAP42356 2102 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 K7EM74 188 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 SOCS3O14543 225 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 DEFB112Q30KQ8 113 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 FXYD5Q96DB9 178 aa9.58□□□□□ -0.88
COL8A1-201ENST00000261037 IGLV1-44P01699 117 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 NCOR1O75376 2440 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 KLF5Q13887 457 aaPredicted RBP9.57□□□□□ -0.88
COL8A1-201ENST00000261037 PLA2G2CQ5R387 149 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 GVINP1Q7Z2Y8 2422 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 K7ERJ3 54 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 CRLF1O75462 422 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 PRB1P04280 392 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 Q6ZWC4 215 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 VOPP1Q96AW1 172 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms