RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 K7EMT4 169 aa17■□□□□ 0.31
SIX3-201ENST00000260653 TYMSP04818 313 aa17■□□□□ 0.31
SIX3-201ENST00000260653 RNASE1P07998 156 aaKnown RBP17■□□□□ 0.31
SIX3-201ENST00000260653 RBX1P62877 108 aa17■□□□□ 0.31
SIX3-201ENST00000260653 DDTP30046 118 aa17■□□□□ 0.31
SIX3-201ENST00000260653 DEFB136Q30KP8 78 aa17■□□□□ 0.31
SIX3-201ENST00000260653 HIVEP1P15822 2718 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 C19orf71A6NCJ1 209 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 Q8TAT8 98 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 C8orf49Q96NF6 230 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 ZNF492Q9P255 531 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 UFC1Q9Y3C8 167 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 HOXD3P31249 432 aaPredicted RBP16.99■□□□□ 0.31
SIX3-201ENST00000260653 SYNJ2BPP57105 145 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 ZNF418Q8TF45 676 aaPredicted RBP16.99■□□□□ 0.31
SIX3-201ENST00000260653 C16orf92Q96LL3 132 aa16.99■□□□□ 0.31
SIX3-201ENST00000260653 TMEM213A2RRL7 107 aa16.98■□□□□ 0.31
SIX3-201ENST00000260653 RPL11P62913 178 aaKnown RBP16.98■□□□□ 0.31
SIX3-201ENST00000260653 KHDC1LQ5JSQ8 128 aa16.98■□□□□ 0.31
SIX3-201ENST00000260653 GBGT1Q8N5D6 347 aa16.98■□□□□ 0.31
SIX3-201ENST00000260653 NSD1Q96L73 2696 aaPredicted RBP16.98■□□□□ 0.31
SIX3-201ENST00000260653 SMIM27A0A1W2PRY6 76 aa16.98■□□□□ 0.31
SIX3-201ENST00000260653 ZNF25P17030 456 aaPredicted RBP16.98■□□□□ 0.31
SIX3-201ENST00000260653 IGKV3-7A0A075B6H7 116 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 PHOX2AO14813 284 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 HILS1P60008 231 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 P01737 135 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 CDX1P47902 265 aaPredicted RBP16.97■□□□□ 0.31
SIX3-201ENST00000260653 FRZBQ92765 325 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 BTF3L4Q96K17 158 aa16.97■□□□□ 0.31
SIX3-201ENST00000260653 TRAV9-1A0A075B6T8 112 aa16.96■□□□□ 0.31
SIX3-201ENST00000260653 ERCC8Q13216 396 aa16.96■□□□□ 0.31
SIX3-201ENST00000260653 RPP21Q9H633 154 aaKnown RBP16.96■□□□□ 0.31
SIX3-201ENST00000260653 NRN1Q9NPD7 142 aa16.96■□□□□ 0.31
SIX3-201ENST00000260653 SOCS3O14543 225 aa16.96■□□□□ 0.3
SIX3-201ENST00000260653 SPINK4O60575 86 aa16.96■□□□□ 0.3
SIX3-201ENST00000260653 DAZAP1Q96EP5 407 aaKnown RBP16.96■□□□□ 0.3
SIX3-201ENST00000260653 A8MWP6 167 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 FRMD6-AS1P0C7T7 363 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 FABP9Q0Z7S8 132 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 C20orf173Q96LM9 149 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 DLEU1O43261 78 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BKO60814 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BJP06899 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BOP23527 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BBP33778 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BDP58876 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BCP62807 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST2H2BEQ16778 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.95■□□□□ 0.3
SIX3-201ENST00000260653 WIPF2Q8TF74 440 aaPredicted RBP16.95■□□□□ 0.3
SIX3-201ENST00000260653 C4orf3Q8WVX3 66 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BHQ93079 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 MRPL53Q96EL3 112 aaKnown RBP16.95■□□□□ 0.3
SIX3-201ENST00000260653 PRR25Q96S07 402 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BNQ99877 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 HIST1H2BMQ99879 126 aa16.95■□□□□ 0.3
SIX3-201ENST00000260653 CRIP1P50238 77 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 SETXQ7Z333 2677 aaKnown RBP16.94■□□□□ 0.3
SIX3-201ENST00000260653 SLURP1P55000 103 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 TCF24Q7RTU0 167 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 TSKUQ8WUA8 353 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 DUX3Q96PT4 197 aa16.94■□□□□ 0.3
SIX3-201ENST00000260653 NPIPB6E9PJ23 425 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 LGALS9O00182 355 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 TRGC1P0CF51 173 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 C11orf44Q8N8P7 122 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 RBAKDNA6NC62 111 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 FBLL1A6NHQ2 334 aaKnown RBP16.93■□□□□ 0.3
SIX3-201ENST00000260653 GAGE1Q13065 139 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 ACTL10Q5JWF8 245 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 KLHL30-AS1Q8NEE0 82 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 LINC01006Q8NI28 216 aa16.93■□□□□ 0.3
SIX3-201ENST00000260653 NPSP0C0P6 89 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 OR11H1Q8NG94 326 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 WFDC12Q8WWY7 111 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 INAFM1C9JVW0 142 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 CT45A10P0DMU9 189 aa16.92■□□□□ 0.3
SIX3-201ENST00000260653 KLF5Q13887 457 aaPredicted RBP16.92■□□□□ 0.3
SIX3-201ENST00000260653 ODF1Q14990 250 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 CT83Q5H943 113 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 ZNF738Q8NE65 137 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 NUP35Q8NFH5 326 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 CLEC5AQ9NY25 188 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 HIGD1CA8MV81 97 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 LINC01619G3V211 115 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 CBLN1P23435 193 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 MRPL54Q6P161 138 aaKnown RBP16.91■□□□□ 0.3
SIX3-201ENST00000260653 OR2D3Q8NGH3 330 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 AGPAT4-IT1Q9H0P7 198 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 C16orf95Q9H693 158 aa16.91■□□□□ 0.3
SIX3-201ENST00000260653 FN1P02751 2386 aaKnown RBP16.9■□□□□ 0.3
SIX3-201ENST00000260653 IZUMO1RA6ND01 250 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 CDKN1BP46527 198 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 RPL19P84098 196 aaKnown RBP16.9■□□□□ 0.3
SIX3-201ENST00000260653 NAT8BQ9UHF3 227 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 TRAPPC1Q9Y5R8 145 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 A8MWL6 223 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 TMEM238C9JI98 176 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 ZNF705DP0CH99 300 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms