RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 KRBOX1C9JBD0 128 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 UBE2G1P62253 170 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 ZNF124Q15973 351 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 TMEM183BQ1AE95 376 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 TMEM75Q8N9X5 138 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 FMC1Q96HJ9 113 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 SMIM7Q9BQ49 75 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 SEC11CQ9BY50 192 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 KLF12Q9Y4X4 402 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 RBAKDNA6NC62 111 aa15.32■□□□□ 0.04
RTCA-201ENST00000260563 ATP6V1G1O75348 118 aa15.32■□□□□ 0.04
RTCA-201ENST00000260563 S100A9P06702 114 aaKnown RBP15.32■□□□□ 0.04
RTCA-201ENST00000260563 FAM74A3Q4VXF1 159 aa15.32■□□□□ 0.04
RTCA-201ENST00000260563 SGK494Q96LW2 274 aa15.32■□□□□ 0.04
RTCA-201ENST00000260563 TRAV8-1A0A0A6YYK1 113 aa15.31■□□□□ 0.04
RTCA-201ENST00000260563 A8MZ25 164 aa15.31■□□□□ 0.04
RTCA-201ENST00000260563 TAS2R60P59551 318 aa15.31■□□□□ 0.04
RTCA-201ENST00000260563 DEFB1P60022 68 aa15.31■□□□□ 0.04
RTCA-201ENST00000260563 AGRNO00468 2067 aa15.3■□□□□ 0.04
RTCA-201ENST00000260563 F6UB75 175 aa15.3■□□□□ 0.04
RTCA-201ENST00000260563 IGLV2-11P01706 119 aa15.3■□□□□ 0.04
RTCA-201ENST00000260563 C10orf91Q5T1B1 145 aa15.3■□□□□ 0.04
RTCA-201ENST00000260563 OR8A1Q8NGG7 326 aa15.3■□□□□ 0.04
RTCA-201ENST00000260563 VGLL1Q99990 258 aa15.3■□□□□ 0.04
RTCA-201ENST00000260563 FBLL1A6NHQ2 334 aaKnown RBP15.29■□□□□ 0.04
RTCA-201ENST00000260563 C9JCJ5 164 aa15.29■□□□□ 0.04
RTCA-201ENST00000260563 FLI1Q01543 452 aaPredicted RBP15.29■□□□□ 0.04
RTCA-201ENST00000260563 OR10J6PQ8NGY7 276 aa15.29■□□□□ 0.04
RTCA-201ENST00000260563 IGF2BP2-AS1Q96M15 143 aa15.29■□□□□ 0.04
RTCA-201ENST00000260563 PSG8Q9UQ74 426 aa15.29■□□□□ 0.04
RTCA-201ENST00000260563 TRBV20OR9-2A0A075B6H5 130 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 TRBV6-1A0A0K0K1D8 114 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 ZNF705DP0CH99 300 aaPredicted RBP15.28■□□□□ 0.04
RTCA-201ENST00000260563 ZNF705BP0CI00 300 aaPredicted RBP15.28■□□□□ 0.04
RTCA-201ENST00000260563 HIST1H1AQ02539 215 aaPredicted RBP15.28■□□□□ 0.04
RTCA-201ENST00000260563 ERCC8Q13216 396 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 CENPWQ5EE01 88 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 ACTL10Q5JWF8 245 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 C9orf47Q6ZRZ4 202 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 PRNTQ86SH4 94 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 Q86TA4 180 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 STHQ8IWL8 128 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 NIPSNAP3BQ9BS92 247 aa15.28■□□□□ 0.04
RTCA-201ENST00000260563 KNCNA6PVL3 124 aa15.27■□□□□ 0.04
RTCA-201ENST00000260563 FRMD6-AS1P0C7T7 363 aa15.27■□□□□ 0.04
RTCA-201ENST00000260563 GNG4P50150 75 aa15.27■□□□□ 0.04
RTCA-201ENST00000260563 GDF5OSQ5U4N7 250 aa15.27■□□□□ 0.04
RTCA-201ENST00000260563 EBLN2Q6P2I7 272 aa15.27■□□□□ 0.04
RTCA-201ENST00000260563 FOXI2Q6ZQN5 318 aa15.27■□□□□ 0.04
RTCA-201ENST00000260563 AGPAT4-IT1Q9H0P7 198 aa15.27■□□□□ 0.04
RTCA-201ENST00000260563 SAV1Q9H4B6 383 aaPredicted RBP15.27■□□□□ 0.04
RTCA-201ENST00000260563 NAT8Q9UHE5 227 aa15.27■□□□□ 0.04
RTCA-201ENST00000260563 CARHSP1Q9Y2V2 147 aaKnown RBP15.27■□□□□ 0.04
RTCA-201ENST00000260563 NPIPB6E9PJ23 425 aa15.27■□□□□ 0.03
RTCA-201ENST00000260563 LTAP01374 205 aa15.27■□□□□ 0.03
RTCA-201ENST00000260563 TMEM241Q24JQ0 296 aa15.27■□□□□ 0.03
RTCA-201ENST00000260563 TMEM78Q5T7P6 136 aa15.27■□□□□ 0.03
RTCA-201ENST00000260563 PRKDCP78527 4128 aaKnown RBP15.26■□□□□ 0.03
RTCA-201ENST00000260563 LOC102724200A0A096LPH7 203 aaPredicted RBP15.26■□□□□ 0.03
RTCA-201ENST00000260563 A0A0J9YX75 114 aa15.26■□□□□ 0.03
RTCA-201ENST00000260563 HLA-DRB4P13762 266 aa15.26■□□□□ 0.03
RTCA-201ENST00000260563 BAGE2Q86Y30 109 aa15.26■□□□□ 0.03
RTCA-201ENST00000260563 LINC00477Q96M19 166 aa15.26■□□□□ 0.03
RTCA-201ENST00000260563 HLA-DRB4X5D2U9 266 aa15.26■□□□□ 0.03
RTCA-201ENST00000260563 RBMY1BA6NDE4 496 aaKnown RBP15.25■□□□□ 0.03
RTCA-201ENST00000260563 RBMY1EA6NEQ0 496 aaKnown RBP15.25■□□□□ 0.03
RTCA-201ENST00000260563 PGPEP1LA6NFU8 196 aa15.25■□□□□ 0.03
RTCA-201ENST00000260563 RBMY1DP0C7P1 496 aaKnown RBP15.25■□□□□ 0.03
RTCA-201ENST00000260563 Q8TAT8 98 aa15.25■□□□□ 0.03
RTCA-201ENST00000260563 SDF2L1Q9HCN8 221 aa15.25■□□□□ 0.03
RTCA-201ENST00000260563 ZNF492Q9P255 531 aa15.25■□□□□ 0.03
RTCA-201ENST00000260563 RPL35AP18077 110 aaKnown RBP15.24■□□□□ 0.03
RTCA-201ENST00000260563 ZNF138P52744 262 aa15.24■□□□□ 0.03
RTCA-201ENST00000260563 TVP23CQ96ET8 276 aa15.24■□□□□ 0.03
RTCA-201ENST00000260563 ASCL2Q99929 193 aa15.24■□□□□ 0.03
RTCA-201ENST00000260563 PPP1R14DQ9NXH3 145 aa15.24■□□□□ 0.03
RTCA-201ENST00000260563 ZFP30Q9Y2G7 519 aa15.24■□□□□ 0.03
RTCA-201ENST00000260563 LY96Q9Y6Y9 160 aa15.24■□□□□ 0.03
RTCA-201ENST00000260563 DUSP14O95147 198 aaKnown RBP15.23■□□□□ 0.03
RTCA-201ENST00000260563 APOC3P02656 99 aa15.23■□□□□ 0.03
RTCA-201ENST00000260563 S100A1P23297 94 aa15.23■□□□□ 0.03
RTCA-201ENST00000260563 TRPT1Q86TN4 253 aaKnown RBP15.23■□□□□ 0.03
RTCA-201ENST00000260563 NHLRC2Q8NBF2 726 aa15.23■□□□□ 0.03
RTCA-201ENST00000260563 OCC1Q8TAD7 63 aa15.23■□□□□ 0.03
RTCA-201ENST00000260563 SMIM12Q96EX1 92 aa15.23■□□□□ 0.03
RTCA-201ENST00000260563 H3BMM0 161 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 IGLV2-8P01709 118 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 RPL23P62829 140 aaKnown RBP15.22■□□□□ 0.03
RTCA-201ENST00000260563 SAPCD1Q5SSQ6 148 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 LINC00322Q6ZN03 302 aaPredicted RBP15.22■□□□□ 0.03
RTCA-201ENST00000260563 LINC01551Q86U37 167 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 TMEM183AQ8IXX5 376 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 NDFIP1Q9BT67 221 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 CT45A10P0DMU9 189 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 APOC4P55056 127 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 PNRC1Q12796 327 aaPredicted RBP15.22■□□□□ 0.03
RTCA-201ENST00000260563 OR4B1Q8NGF8 309 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 MLST8Q9BVC4 326 aa15.22■□□□□ 0.03
RTCA-201ENST00000260563 ADIRFQ15847 76 aa15.21■□□□□ 0.03
RTCA-201ENST00000260563 LENEPQ9Y5L5 61 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 1461.5 ms