RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TAGLN2P37802 199 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 GOLT1AQ6ZVE7 132 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 ARL6IP6Q8N6S5 226 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 EIF5A2Q9GZV4 153 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 SMCO4Q9NRQ5 59 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 SCO2A0A1W2PP80 73 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 S100A8P05109 93 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 HLA-DRB4P13762 266 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 HIST1H1AQ02539 215 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 EBLN2Q6P2I7 272 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 TXNDC17Q9BRA2 123 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 ATG101Q9BSB4 218 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 AURKAIP1Q9NWT8 199 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 HLA-DRB4X5D2U9 266 aa11.68□□□□□ -0.54
CCDC90B-201ENST00000260054 H3BMM0 161 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 PEX7O00628 323 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 SFTA3P0C7M3 94 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 CNN1P51911 297 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 ERCC8Q13216 396 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 RNF212Q495C1 297 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 HIST1H2BAQ96A08 127 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 VGLL1Q99990 258 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 TCEAL7Q9BRU2 100 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 SRD5A3Q9H8P0 318 aa11.67□□□□□ -0.54
CCDC90B-201ENST00000260054 TRAV8-1A0A0A6YYK1 113 aa11.66□□□□□ -0.54
CCDC90B-201ENST00000260054 COLCA2A8K830 154 aa11.66□□□□□ -0.54
CCDC90B-201ENST00000260054 NPIPB6E9PJ23 425 aa11.66□□□□□ -0.54
CCDC90B-201ENST00000260054 SMIM6P0DI80 62 aa11.66□□□□□ -0.54
CCDC90B-201ENST00000260054 CYB561D1Q8N8Q1 229 aa11.66□□□□□ -0.54
CCDC90B-201ENST00000260054 OR10J6PQ8NGY7 276 aa11.66□□□□□ -0.54
CCDC90B-201ENST00000260054 SGK494Q96LW2 274 aa11.66□□□□□ -0.54
CCDC90B-201ENST00000260054 LINC00479Q96M42 142 aa11.66□□□□□ -0.54
CCDC90B-201ENST00000260054 RBAKDNA6NC62 111 aa11.65□□□□□ -0.54
CCDC90B-201ENST00000260054 IGKV3-20P01619 116 aa11.65□□□□□ -0.54
CCDC90B-201ENST00000260054 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.54
CCDC90B-201ENST00000260054 TRPT1Q86TN4 253 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-201ENST00000260054 STHQ8IWL8 128 aa11.65□□□□□ -0.54
CCDC90B-201ENST00000260054 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.54
CCDC90B-201ENST00000260054 AGPAT4-IT1Q9H0P7 198 aa11.65□□□□□ -0.54
CCDC90B-201ENST00000260054 SERTM2A0A1B0GWG4 89 aa11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 F6UZH7 168 aa11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 PDE6DO43924 150 aa11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 IGLV2-11P01706 119 aa11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 C9orf47Q6ZRZ4 202 aa11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 C2CD4CQ8TF44 421 aa11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 C11orf52Q96A22 123 aa11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 TUBA4BQ9H853 241 aa11.65□□□□□ -0.55
CCDC90B-201ENST00000260054 TRAV34A0A0B4J273 112 aa11.64□□□□□ -0.55
CCDC90B-201ENST00000260054 A8MTW9 85 aa11.64□□□□□ -0.55
CCDC90B-201ENST00000260054 C1orf196B1AJZ1 125 aa11.64□□□□□ -0.55
CCDC90B-201ENST00000260054 C9JQL5 133 aa11.64□□□□□ -0.55
CCDC90B-201ENST00000260054 K7EIL1 84 aa11.64□□□□□ -0.55
CCDC90B-201ENST00000260054 DUSP14O95147 198 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-201ENST00000260054 Q8TAT8 98 aa11.64□□□□□ -0.55
CCDC90B-201ENST00000260054 K7EQM0 130 aa11.63□□□□□ -0.55
CCDC90B-201ENST00000260054 UBE2CO00762 179 aa11.63□□□□□ -0.55
CCDC90B-201ENST00000260054 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
CCDC90B-201ENST00000260054 RPL35AP18077 110 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-201ENST00000260054 AKR1C3P42330 323 aa11.63□□□□□ -0.55
CCDC90B-201ENST00000260054 AMTNQ6UX39 209 aa11.63□□□□□ -0.55
CCDC90B-201ENST00000260054 ASCL2Q99929 193 aa11.63□□□□□ -0.55
CCDC90B-201ENST00000260054 DERL1Q9BUN8 251 aa11.63□□□□□ -0.55
CCDC90B-201ENST00000260054 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 SRP19P09132 144 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 TMEM78Q5T7P6 136 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 TMEM75Q8N9X5 138 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 LINC00477Q96M19 166 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 ZNF492Q9P255 531 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 KLF12Q9Y4X4 402 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 C5orf52A6NGY3 159 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 A8MZ25 164 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 TMEM250H0YL14 139 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 MT-ND4LP03901 98 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 CLUHP3Q96NS8 147 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 PSG8Q9UQ74 426 aa11.62□□□□□ -0.55
CCDC90B-201ENST00000260054 ZNF138P52744 262 aa11.61□□□□□ -0.55
CCDC90B-201ENST00000260054 LINC00322Q6ZN03 302 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-201ENST00000260054 TVP23CQ96ET8 276 aa11.61□□□□□ -0.55
CCDC90B-201ENST00000260054 FMC1Q96HJ9 113 aa11.61□□□□□ -0.55
CCDC90B-201ENST00000260054 FAM19A4Q96LR4 140 aa11.61□□□□□ -0.55
CCDC90B-201ENST00000260054 NDUFS6O75380 124 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 FXYD7P58549 80 aa11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 UBE2G1P62253 170 aa11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 Q86TA4 180 aa11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 ZFP82Q8N141 532 aa11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 SMDT1Q9H4I9 107 aa11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 PPP1R14DQ9NXH3 145 aa11.6□□□□□ -0.55
CCDC90B-201ENST00000260054 LOC102724200A0A096LPH7 203 aaPredicted RBP11.59□□□□□ -0.55
CCDC90B-201ENST00000260054 M0R2Z0 102 aa11.59□□□□□ -0.55
CCDC90B-201ENST00000260054 S100A6P06703 90 aa11.59□□□□□ -0.55
CCDC90B-201ENST00000260054 CEBPGP53567 150 aa11.59□□□□□ -0.55
CCDC90B-201ENST00000260054 SNRPEP62304 92 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-201ENST00000260054 SPINK13Q1W4C9 94 aa11.59□□□□□ -0.55
CCDC90B-201ENST00000260054 ODF3Q96PU9 254 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms