RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 LCNL1Q6ZST4 164 aa10.35□□□□□ -0.75
PGBD1-201ENST00000259883 C21orf62Q9NYP8 219 aa10.35□□□□□ -0.75
PGBD1-201ENST00000259883 VPS13CQ709C8 3753 aa10.35□□□□□ -0.75
PGBD1-201ENST00000259883 GTSCR1Q86UQ5 136 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 DPM3Q9P2X0 92 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 AGRNO00468 2067 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 A1L4Q6 167 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 LEPP41159 167 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 DEFB1P60022 68 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 PLP1P60201 277 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 CDSNQ15517 529 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 C3orf36Q3SXR2 165 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 SMIM12Q96EX1 92 aa10.34□□□□□ -0.75
PGBD1-201ENST00000259883 PEF1Q9UBV8 284 aaKnown RBP10.34□□□□□ -0.75
PGBD1-201ENST00000259883 OVOL3O00110 214 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 CCL21O00585 134 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 CD5LO43866 347 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 MFAP4P55083 255 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 HBDP02042 147 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 RPL24P83731 157 aaKnown RBP10.33□□□□□ -0.76
PGBD1-201ENST00000259883 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 FANCD2OSQ96PS1 177 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 CDKN1BP46527 198 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 PRR25Q96S07 402 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 TMEM160Q9NX00 188 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 KAAG1Q9UBP8 84 aa10.33□□□□□ -0.76
PGBD1-201ENST00000259883 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
PGBD1-201ENST00000259883 IL17RELQ6ZVW7 336 aa10.32□□□□□ -0.76
PGBD1-201ENST00000259883 FOXC2Q99958 501 aa10.32□□□□□ -0.76
PGBD1-201ENST00000259883 B9A039 149 aa10.32□□□□□ -0.76
PGBD1-201ENST00000259883 C5orf64Q2M2E5 130 aa10.32□□□□□ -0.76
PGBD1-201ENST00000259883 MS4A6AQ9H2W1 248 aa10.32□□□□□ -0.76
PGBD1-201ENST00000259883 PVRIGQ6DKI7 326 aa10.31□□□□□ -0.76
PGBD1-201ENST00000259883 USP9YO00507 2555 aaPredicted RBP10.31□□□□□ -0.76
PGBD1-201ENST00000259883 A0A0G2JLM5 398 aa10.31□□□□□ -0.76
PGBD1-201ENST00000259883 G3V318 75 aa10.31□□□□□ -0.76
PGBD1-201ENST00000259883 GOSR1O95249 250 aa10.31□□□□□ -0.76
PGBD1-201ENST00000259883 SAPCD1Q5SSQ6 148 aa10.31□□□□□ -0.76
PGBD1-201ENST00000259883 SFTA2Q6UW10 78 aa10.31□□□□□ -0.76
PGBD1-201ENST00000259883 TRGV3P03979 118 aa10.3□□□□□ -0.76
PGBD1-201ENST00000259883 CLEC3BP05452 202 aa10.3□□□□□ -0.76
PGBD1-201ENST00000259883 CLEC19AQ6UXS0 136 aa10.3□□□□□ -0.76
PGBD1-201ENST00000259883 SMAD7O15105 426 aaKnown RBP10.3□□□□□ -0.76
PGBD1-201ENST00000259883 HIF1ANQ9NWT6 349 aa10.3□□□□□ -0.76
PGBD1-201ENST00000259883 CRYBG3Q68DQ2 2970 aa10.3□□□□□ -0.76
PGBD1-201ENST00000259883 POLQO75417 2590 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 LINC01548A6NM66 108 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 FGF6P10767 208 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 C15orf32Q32M92 178 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 SPCS1Q9Y6A9 102 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
PGBD1-201ENST00000259883 C8orf31Q8N9H6 132 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 TMEM158Q8WZ71 300 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 NHP2Q9NX24 153 aaKnown RBP10.29□□□□□ -0.76
PGBD1-201ENST00000259883 SMAD5-AS1Q9Y6J3 95 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 RPL7P18124 248 aaKnown RBP10.29□□□□□ -0.76
PGBD1-201ENST00000259883 EFNA4P52798 201 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 WFDC12Q8WWY7 111 aa10.29□□□□□ -0.76
PGBD1-201ENST00000259883 A6NDN8 102 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 F8W735 103 aaPredicted RBP10.28□□□□□ -0.76
PGBD1-201ENST00000259883 NDUFA3O95167 84 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 FXYD2P54710 66 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 TMEM219Q86XT9 240 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 OR2K2Q8NGT1 345 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 CFHR4Q92496 578 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 MAP1LC3AQ9H492 121 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 SETD2Q9BYW2 2564 aaPredicted RBP10.28□□□□□ -0.76
PGBD1-201ENST00000259883 K7ERU9 68 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 RPL11P62913 178 aaKnown RBP10.28□□□□□ -0.76
PGBD1-201ENST00000259883 VMO1Q7Z5L0 202 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 TNFRSF14Q92956 283 aa10.28□□□□□ -0.76
PGBD1-201ENST00000259883 CTSGP08311 255 aa10.27□□□□□ -0.76
PGBD1-201ENST00000259883 HOXB4P17483 251 aaPredicted RBP10.27□□□□□ -0.76
PGBD1-201ENST00000259883 GLMPQ8WWB7 406 aa10.27□□□□□ -0.76
PGBD1-201ENST00000259883 TRAV40A0A0B4J280 105 aa10.27□□□□□ -0.77
PGBD1-201ENST00000259883 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
PGBD1-201ENST00000259883 ZC2HC1BQ5TFG8 222 aa10.27□□□□□ -0.77
PGBD1-201ENST00000259883 IGLV11-55A0A075B6I3 123 aa10.27□□□□□ -0.77
PGBD1-201ENST00000259883 WI2-2373I1.2A0A1W2PRP0 233 aa10.27□□□□□ -0.77
PGBD1-201ENST00000259883 CEACAM3P40198 252 aa10.27□□□□□ -0.77
PGBD1-201ENST00000259883 TIMD4Q96H15 378 aa10.27□□□□□ -0.77
PGBD1-201ENST00000259883 LY6LH3BQJ8 138 aa10.26□□□□□ -0.77
PGBD1-201ENST00000259883 IGF1P05019 195 aa10.26□□□□□ -0.77
PGBD1-201ENST00000259883 C16orf54Q6UWD8 224 aa10.26□□□□□ -0.77
PGBD1-201ENST00000259883 RAB1BQ9H0U4 201 aa10.26□□□□□ -0.77
PGBD1-201ENST00000259883 CACNA1AO00555 2505 aa10.26□□□□□ -0.77
PGBD1-201ENST00000259883 M0R381 172 aa10.26□□□□□ -0.77
PGBD1-201ENST00000259883 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
PGBD1-201ENST00000259883 C9orf118A6NHY6 69 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 TLN2Q9Y4G6 2542 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 H3BVH4 76 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 SEC11AP67812 179 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 SPANXN1Q5VSR9 72 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 Q6AWC8 147 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 DTX2Q86UW9 622 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 BOD1L2Q8IYS8 172 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 C2CD3Q4AC94 2353 aa10.25□□□□□ -0.77
PGBD1-201ENST00000259883 TMEM8BA6NDV4 472 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms