RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 IGHV3-53P01767 116 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 PLP1P60201 277 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 MYO7BQ6PIF6 2116 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 A0A087WW49 117 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 MED14OSP0DP75 135 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 KNCNA6PVL3 124 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 MMP23AO75900 390 aa10.5□□□□□ -0.73
PRPF38A-201ENST00000257181 IFITM3Q01628 133 aa10.5□□□□□ -0.73
PRPF38A-201ENST00000257181 RNF144BQ7Z419 303 aa10.5□□□□□ -0.73
PRPF38A-201ENST00000257181 LYZL1Q6UWQ5 148 aa10.5□□□□□ -0.73
PRPF38A-201ENST00000257181 C5orf24Q7Z6I8 188 aa10.5□□□□□ -0.73
PRPF38A-201ENST00000257181 SMIM6P0DI80 62 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 HSPB9Q9BQS6 159 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 NHP2Q9NX24 153 aaKnown RBP10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 ARMS2P0C7Q2 107 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 NCOR1O75376 2440 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 A0A087X0K7 114 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 NCR2O95944 276 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 NFE4Q86UQ8 179 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 C21orf62-AS1Q17RA5 79 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 C15orf53Q8NAA6 179 aa10.49□□□□□ -0.73
PRPF38A-201ENST00000257181 PTPRSQ13332 1948 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 JPT2Q9H910 190 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 ZNF580Q9UK33 172 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 CACNA1HO95180 2353 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 BLCAPP62952 87 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 NKAPP1Q8N9T2 125 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 I3L2K1 104 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 Q0VG73 95 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 FAM231DQ6ZW35 169 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 C16orf95Q9H693 158 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 UQCR10Q9UDW1 63 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 GAGE12JA6NER3 117 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 LINC00158P58513 81 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 GAGE1Q13065 139 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 GAGE4Q13068 117 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 GAGE5Q13069 117 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 DAZ2Q13117 558 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 GAGE13Q4V321 117 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 ZNF524Q96C55 264 aa10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 MRPL16Q9NX20 251 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-201ENST00000257181 LINC01548A6NM66 108 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 MIFP14174 115 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 PRR25Q96S07 402 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 KIR2DL5BA0A0G2JN68 375 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 KIR2DL5BA0A0G2JPC4 375 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 KIR2DL5AQ8N109 375 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 KIR2DL5BQ8NHK3 375 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 C20orf78Q9BR46 151 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 CEP192Q8TEP8 1941 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 GPR179Q6PRD1 2367 aa10.47□□□□□ -0.73
PRPF38A-201ENST00000257181 F8W735 103 aaPredicted RBP10.46□□□□□ -0.73
PRPF38A-201ENST00000257181 LINC00614P0C842 121 aa10.46□□□□□ -0.73
PRPF38A-201ENST00000257181 C11orf45Q8TAV5 145 aa10.46□□□□□ -0.73
PRPF38A-201ENST00000257181 RNF183Q96D59 192 aa10.46□□□□□ -0.73
PRPF38A-201ENST00000257181 OCC1Q8TAD7 63 aa10.46□□□□□ -0.73
PRPF38A-201ENST00000257181 NDUFAF3Q9BU61 184 aa10.46□□□□□ -0.73
PRPF38A-201ENST00000257181 PCDH15Q96QU1 1955 aa10.46□□□□□ -0.74
PRPF38A-201ENST00000257181 TRAV8-1A0A0A6YYK1 113 aa10.46□□□□□ -0.74
PRPF38A-201ENST00000257181 TPRP12270 2363 aaKnown RBP10.46□□□□□ -0.74
PRPF38A-201ENST00000257181 KLF5Q13887 457 aaPredicted RBP10.46□□□□□ -0.74
PRPF38A-201ENST00000257181 H0YIZ8 118 aa10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 CXCL1P09341 107 aa10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 WFDC1Q9HC57 220 aa10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 INTS1Q8N201 2190 aaKnown RBP10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 Q6ZSV7 163 aa10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 CST9LQ9H4G1 147 aa10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 LSM4Q9Y4Z0 139 aaKnown RBP10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 SDK2Q58EX2 2172 aa10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 NHLRC4P0CG21 123 aaPredicted RBP10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 FABP2P12104 132 aa10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 GCSAMLQ5JQS6 135 aa10.45□□□□□ -0.74
PRPF38A-201ENST00000257181 TPSG1Q9NRR2 321 aa10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 WI2-2373I1.2A0A1W2PRP0 233 aa10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 SLC17A3O00476 420 aa10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 IGKCP01834 107 aa10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 HERVK_113P63121 156 aa10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 C1orf159Q96HA4 380 aa10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 C14orf178Q8N769 122 aaPredicted RBP10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 CGB7P0DN87 165 aa10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 CD300EQ496F6 205 aaPredicted RBP10.44□□□□□ -0.74
PRPF38A-201ENST00000257181 NEGR1Q7Z3B1 354 aa10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 LINC00482Q8N8I6 264 aa10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 ANXA2RQ3ZCQ2 193 aa10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 MDKP21741 143 aaPredicted RBP10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 Q8TAT8 98 aa10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 FREM3P0C091 2139 aa10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 K7EQD1 137 aa10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 LEPROTO15243 131 aa10.43□□□□□ -0.74
PRPF38A-201ENST00000257181 TRAV10A0A0B4J240 114 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 TYMSP04818 313 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 DIAPH2-AS1Q14236 149 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms