RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 C11orf68Q9H3H3 251 aaKnown RBP15.08■□□□□ 0
PTPRE-201ENST00000254667 hDV102S1A0JD36 115 aa15.08■□□□□ 0
PTPRE-201ENST00000254667 APOC4P55056 127 aa15.08■□□□□ 0
PTPRE-201ENST00000254667 ZNF726P1Q15940 193 aa15.08■□□□□ 0
PTPRE-201ENST00000254667 TMEM213A2RRL7 107 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 HOXB4P17483 251 aaPredicted RBP15.07■□□□□ 0
PTPRE-201ENST00000254667 DIAPH2-AS1Q14236 149 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 Q8N8P6 123 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 KRTAP27-1Q3LI81 207 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 DAD1P61803 113 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 OR11H6Q8NGC7 330 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 DOPEY2Q9Y3R5 2298 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 LEPROTO15243 131 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 MRPL52Q86TS9 123 aaKnown RBP15.07■□□□□ 0
PTPRE-201ENST00000254667 CTSZQ9UBR2 303 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 C9JQL5 133 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 I3L3M4 83 aa15.07■□□□□ 0
PTPRE-201ENST00000254667 PRIMA1Q86XR5 153 aa15.06■□□□□ 0
PTPRE-201ENST00000254667 LHBP01229 141 aa15.06■□□□□ 0
PTPRE-201ENST00000254667 HAPLN4Q86UW8 402 aa15.06■□□□□ 0
PTPRE-201ENST00000254667 C11orf52Q96A22 123 aa15.06■□□□□ 0
PTPRE-201ENST00000254667 Q6ZSR3 168 aa15.06■□□□□ 0
PTPRE-201ENST00000254667 DEFB104AQ8WTQ1 72 aa15.06■□□□□ 0
PTPRE-201ENST00000254667 VPREB3Q9UKI3 123 aa15.06■□□□□ 0
PTPRE-201ENST00000254667 NDUFS6O75380 124 aaKnown RBP15.05■□□□□ 0
PTPRE-201ENST00000254667 SRSF2Q01130 221 aaKnown RBP15.05■□□□□ 0
PTPRE-201ENST00000254667 SPTAN1Q13813 2472 aaKnown RBP15.05■□□□□ 0
PTPRE-201ENST00000254667 TRBV25-1A0A075B6N4 114 aa15.05■□□□□ -0
PTPRE-201ENST00000254667 TRAV8-4A0A0B4J246 113 aa15.05■□□□□ -0
PTPRE-201ENST00000254667 CYYR1Q96J86 154 aa15.05■□□□□ -0
PTPRE-201ENST00000254667 FAM120AOSQ5T036 256 aa15.05■□□□□ -0
PTPRE-201ENST00000254667 AZU1P20160 251 aa15.05■□□□□ -0
PTPRE-201ENST00000254667 GATD1Q8NB37 220 aa15.05■□□□□ -0
PTPRE-201ENST00000254667 C18orf32Q8TCD1 76 aa15.05■□□□□ -0
PTPRE-201ENST00000254667 KLK9Q9UKQ9 250 aa15.05■□□□□ -0
PTPRE-201ENST00000254667 YLPM1P49750 1951 aaKnown RBP15.05■□□□□ -0
PTPRE-201ENST00000254667 PRR20EP86478 221 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 PRR20CP86479 221 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 PRR20DP86480 221 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 PRR20BP86481 221 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 PRR20AP86496 221 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 MEGF9Q9H1U4 602 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 ATP6V0BQ99437 205 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 TP53TG1Q9Y2A0 90 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 WIPF3A6NGB9 483 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 C2orf66Q6UXQ4 117 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 FXYD5Q96DB9 178 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 DKK4Q9UBT3 224 aa15.04■□□□□ -0
PTPRE-201ENST00000254667 KLF2Q9Y5W3 355 aaPredicted RBP15.04■□□□□ -0
PTPRE-201ENST00000254667 NEGR1Q7Z3B1 354 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 SPXQ9BT56 116 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 KNCNA6PVL3 124 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 A8MWP6 167 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 ESDP10768 282 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 ANXA2RQ3ZCQ2 193 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 ZNF491Q8N8L2 437 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 V9GYV3 84 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 GAGE12JA6NER3 117 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 NPC2P61916 151 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 GAGE1Q13065 139 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 GAGE4Q13068 117 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 GAGE5Q13069 117 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 PYY3Q5JQD4 70 aa15.03■□□□□ -0
PTPRE-201ENST00000254667 F5H768 121 aa15.02■□□□□ -0
PTPRE-201ENST00000254667 WNK2Q9Y3S1 2297 aa15.02■□□□□ -0
PTPRE-201ENST00000254667 SMIM27A0A1W2PRY6 76 aa15.02■□□□□ -0
PTPRE-201ENST00000254667 IGLC7A0M8Q6 106 aa15.02■□□□□ -0
PTPRE-201ENST00000254667 SSBP2P81877 361 aaPredicted RBP15.02■□□□□ -0
PTPRE-201ENST00000254667 GRNP28799 593 aaKnown RBP15.02□□□□□ -0.01
PTPRE-201ENST00000254667 PCP4P48539 62 aa15.02□□□□□ -0.01
PTPRE-201ENST00000254667 DOCK7Q96N67 2140 aa15.02□□□□□ -0.01
PTPRE-201ENST00000254667 IL15RAQ13261 267 aa15.02□□□□□ -0.01
PTPRE-201ENST00000254667 MRPL53Q96EL3 112 aaKnown RBP15.02□□□□□ -0.01
PTPRE-201ENST00000254667 DEFB112Q30KQ8 113 aa15.01□□□□□ -0.01
PTPRE-201ENST00000254667 SDHAF1A6NFY7 115 aa15□□□□□ -0.01
PTPRE-201ENST00000254667 PMVKQ15126 192 aa15□□□□□ -0.01
PTPRE-201ENST00000254667 CHAC1Q9BUX1 264 aa15□□□□□ -0.01
PTPRE-201ENST00000254667 A0A087X0K7 114 aa15□□□□□ -0.01
PTPRE-201ENST00000254667 DEFB113Q30KQ7 82 aa15□□□□□ -0.01
PTPRE-201ENST00000254667 MRPL51Q4U2R6 128 aaKnown RBP15□□□□□ -0.01
PTPRE-201ENST00000254667 CENPVL3A0A0U1RRI6 287 aa15□□□□□ -0.01
PTPRE-201ENST00000254667 NDUFS7O75251 213 aa14.99□□□□□ -0.01
PTPRE-201ENST00000254667 LGALS1P09382 135 aaKnown RBP14.99□□□□□ -0.01
PTPRE-201ENST00000254667 SPRY4Q9C004 299 aa14.99□□□□□ -0.01
PTPRE-201ENST00000254667 FOXI2Q6ZQN5 318 aa14.99□□□□□ -0.01
PTPRE-201ENST00000254667 DLX4Q92988 240 aaPredicted RBP14.99□□□□□ -0.01
PTPRE-201ENST00000254667 TSSC4Q9Y5U2 329 aaPredicted RBP14.99□□□□□ -0.01
PTPRE-201ENST00000254667 VWC2Q2TAL6 325 aa14.99□□□□□ -0.01
PTPRE-201ENST00000254667 MPV17L2Q567V2 206 aa14.99□□□□□ -0.01
PTPRE-201ENST00000254667 NPBQ8NG41 125 aa14.98□□□□□ -0.01
PTPRE-201ENST00000254667 LENEPQ9Y5L5 61 aa14.98□□□□□ -0.01
PTPRE-201ENST00000254667 TMEM243Q9BU79 118 aa14.98□□□□□ -0.01
PTPRE-201ENST00000254667 ZNF114Q8NC26 417 aa14.98□□□□□ -0.01
PTPRE-201ENST00000254667 ZC2HC1AQ96GY0 325 aa14.97□□□□□ -0.01
PTPRE-201ENST00000254667 ABCA1O95477 2261 aa14.97□□□□□ -0.01
PTPRE-201ENST00000254667 GAGE12BA1L429 117 aa14.97□□□□□ -0.01
PTPRE-201ENST00000254667 GAGE7O76087 117 aa14.97□□□□□ -0.01
PTPRE-201ENST00000254667 GAGE12FP0CL80 117 aa14.97□□□□□ -0.01
PTPRE-201ENST00000254667 GAGE12GP0CL81 117 aa14.97□□□□□ -0.01
PTPRE-201ENST00000254667 GAGE12IP0CL82 117 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms