RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SRRM5B3KS81 715 aa10.64□□□□□ -0.71
PCDHGA3-201ENST00000253812 FGFBP3Q8TAT2 258 aa10.64□□□□□ -0.71
PCDHGA3-201ENST00000253812 RNF5Q99942 180 aa10.64□□□□□ -0.71
PCDHGA3-201ENST00000253812 CELA3BP08861 270 aa10.64□□□□□ -0.71
PCDHGA3-201ENST00000253812 RS1O15537 224 aa10.64□□□□□ -0.71
PCDHGA3-201ENST00000253812 TRAV13-2A0A0B4J235 113 aa10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 NTN3O00634 580 aaPredicted RBP10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 TIMM23O14925 209 aa10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 RNF144BQ7Z419 303 aa10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 STHQ8IWL8 128 aa10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 ARFGEF3Q5TH69 2177 aa10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 CD59P13987 128 aa10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 IGHV1-2P23083 117 aa10.63□□□□□ -0.71
PCDHGA3-201ENST00000253812 DSCR8Q96T75 97 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 MYO18BQ8IUG5 2567 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 IGHG3P01860 377 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 TFF1P04155 84 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 SMIM2Q9BVW6 85 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 WIPF3A6NGB9 483 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 SHISA9B4DS77 424 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 IL15RAQ13261 267 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 C15orf32Q32M92 178 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 DTX1Q86Y01 620 aa10.62□□□□□ -0.71
PCDHGA3-201ENST00000253812 TINCRA0A1B0GVN0 87 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 DTX2Q86UW9 622 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 RNF183Q96D59 192 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 A0A087WWL8 130 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 MLANAQ16655 118 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 SCRT2Q9NQ03 307 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 SONP18583 2426 aaKnown RBP10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 KIAA2026Q5HYC2 2103 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 A0A0B4J2C4 111 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 BAALC-AS2P0C853 105 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 CSRP1P21291 193 aaKnown RBP10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 LINC01545Q5VT33 79 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 C5orf24Q7Z6I8 188 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 NUPR1O60356 82 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 CR1LQ2VPA4 569 aa10.61□□□□□ -0.71
PCDHGA3-201ENST00000253812 IGHV3-73A0A0B4J1V6 119 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 ATP5G1P05496 136 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 FOXG1P55316 489 aaPredicted RBP10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 ZCCHC24Q8N2G6 241 aaKnown RBP10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 IGHV3OR16-10A0A075B7F0 116 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 CRLF1O75462 422 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 PKDREJQ9NTG1 2253 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 PLXNA3P51805 1871 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 MYO7BQ6PIF6 2116 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 BRK1Q8WUW1 75 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 HIGD1BQ9P298 99 aa10.6□□□□□ -0.71
PCDHGA3-201ENST00000253812 ANKRD39Q53RE8 183 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 Q6P435 159 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 NEU4Q8WWR8 484 aaPredicted RBP10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 NOTCH4Q99466 2003 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 C3orf56Q8N813 242 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 SPG11Q96JI7 2443 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 H0YJW9 148 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 HTN3P15516 51 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 ZNF493Q6ZR52 646 aa10.59□□□□□ -0.71
PCDHGA3-201ENST00000253812 F6UB75 175 aa10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 EFNA4P52798 201 aa10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 NBL1P41271 181 aa10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 LINC01620Q4KN68 170 aa10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 CHD3Q12873 2000 aaKnown RBP10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 A0A1W2PPI3 338 aa10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 FAM27E3Q08E93 113 aa10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 MRPL55Q7Z7F7 128 aaKnown RBP10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 TRBV19A0A075B6N1 114 aa10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 ZNF581Q9P0T4 197 aa10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.72
PCDHGA3-201ENST00000253812 FXYD2P54710 66 aa10.57□□□□□ -0.72
PCDHGA3-201ENST00000253812 C20orf78Q9BR46 151 aa10.57□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGFL4Q6B9Z1 124 aa10.57□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
PCDHGA3-201ENST00000253812 I3L3M4 83 aa10.57□□□□□ -0.72
PCDHGA3-201ENST00000253812 RHODO00212 210 aa10.57□□□□□ -0.72
PCDHGA3-201ENST00000253812 SIGLEC9Q9Y336 463 aa10.57□□□□□ -0.72
PCDHGA3-201ENST00000253812 C5orf63A6NC05 138 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 PINLYPA6NC86 204 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 E9PQ18 207 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 SS18Q15532 418 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 SVIPQ8NHG7 77 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 PRR25Q96S07 402 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 FANCMQ8IYD8 2048 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 K7EMI3 77 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 K7EN84 100 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 EFNA2O43921 213 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 RBX1P62877 108 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 TMEM14BQ9NUH8 114 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 V9GYY9 64 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 EGR2P11161 476 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 LINC00205P59089 165 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 C3orf36Q3SXR2 165 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 TRAV41A0A0B4J266 112 aa10.56□□□□□ -0.72
PCDHGA3-201ENST00000253812 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGHV1-3A0A0C4DH29 117 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 PSMB8P28062 276 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 C20orf204Q6ZNR8 217 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms