RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 DAZ2Q13117 558 aaKnown RBP7.12□□□□□ -1.27
VPS50-201ENST00000251739 CLINT1Q14677 625 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 TTC32Q5I0X7 151 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 C10orf113Q5VZT2 155 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 GNPNAT1Q96EK6 184 aaPredicted RBP7.12□□□□□ -1.27
VPS50-201ENST00000251739 C18orf15Q96N68 181 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 MRPS16Q9Y3D3 137 aaKnown RBP7.12□□□□□ -1.27
VPS50-201ENST00000251739 HERC1Q15751 4861 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 VPS13BQ7Z7G8 4022 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 ZNF253O75346 499 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 IL7P13232 177 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 CAMLGP49069 296 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 GUK1Q16774 197 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 ESRGQ1W209 222 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 VWC2Q2TAL6 325 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 Q8N1X5 172 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 C11orf72Q8NBR9 251 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 ZNF431Q8TF32 576 aaPredicted RBP7.11□□□□□ -1.27
VPS50-201ENST00000251739 FAM19A4Q96LR4 140 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 PYGO2Q9BRQ0 406 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 WDR83OSQ9Y284 106 aa7.11□□□□□ -1.27
VPS50-201ENST00000251739 A0A0J9YY99 117 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 KLLNB2CW77 178 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 CCSO14618 274 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 PLA2G10O15496 165 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 GAGE7O76087 117 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 RLN2P04090 185 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 GAGE12FP0CL80 117 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 GAGE12GP0CL81 117 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 GAGE12IP0CL82 117 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 LEPP41159 167 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 INPP1P49441 399 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 OR5I1Q13606 314 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 MIC13Q5XKP0 118 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 Q6ZRN7 208 aaPredicted RBP7.1□□□□□ -1.27
VPS50-201ENST00000251739 Q6ZTI0 123 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 SPATA12Q7Z6I5 190 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 NRARPQ7Z6K4 114 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 STX12Q86Y82 276 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 CHAC2Q8WUX2 184 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 S100ZQ8WXG8 99 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
VPS50-201ENST00000251739 VSIG2Q96IQ7 327 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 LINC00467Q9BRT7 94 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 C20orf85Q9H1P6 137 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 DNAJC4Q9NNZ3 241 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 ZNF586Q9NXT0 402 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 GSKIPQ9P0R6 139 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 FAT1Q14517 4588 aa7.1□□□□□ -1.27
VPS50-201ENST00000251739 TRBV19A0A075B6N1 114 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 TRAV5A0A0B4J249 113 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 TRAV12-3A0A0B4J271 114 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 CENPXA8MT69 81 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 SNURFLB1AK76 121 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 M0R3E3 92 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 NDUFB4O95168 129 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 IL15RAQ13261 267 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 UQCC1Q9NVA1 299 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 TMEM14CQ9P0S9 112 aa7.09□□□□□ -1.27
VPS50-201ENST00000251739 A0A096LPF7 62 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 ZNF324O75467 553 aaPredicted RBP7.08□□□□□ -1.28
VPS50-201ENST00000251739 CST7O76096 145 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 SLC25A5P05141 298 aaKnown RBP7.08□□□□□ -1.28
VPS50-201ENST00000251739 RPL29P47914 159 aaKnown RBP7.08□□□□□ -1.28
VPS50-201ENST00000251739 RAB31Q13636 194 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 PDE6HQ13956 83 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 ANXA2RQ3ZCQ2 193 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 Q6ZRG5 221 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 ZNF680Q8NEM1 530 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 OR1L4Q8NGR5 311 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 PFDN5Q99471 154 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 LYRM2Q9NU23 88 aaPredicted RBP7.08□□□□□ -1.28
VPS50-201ENST00000251739 SLC39A9Q9NUM3 307 aa7.08□□□□□ -1.28
VPS50-201ENST00000251739 IGSF23A1L1A6 192 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 C7orf71A4D174 169 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 FAM24AA6NFZ4 105 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 J3KRW8 73 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 L7N2F9 121 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 CRISP2P16562 243 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 SULT1A1P50225 295 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 CAV2P51636 162 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 LINC00315P59091 139 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 VAMP2P63027 116 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 CD300CQ08708 224 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 ZNF846Q147U1 533 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 AGPAT4-IT1Q9H0P7 198 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 GSN-AS1Q9NRJ2 163 aa7.07□□□□□ -1.28
VPS50-201ENST00000251739 LSM5Q9Y4Y9 91 aaKnown RBP7.07□□□□□ -1.28
VPS50-201ENST00000251739 MYCBP2O75592 4640 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 UBE2L5PA0A1B0GUS4 154 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 LYRM1O43325 122 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 SPINK4O60575 86 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 TCRBP04435 133 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 NMBP08949 121 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 HIST1H1EP10412 219 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 312.8 ms