RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 PPP1R14DQ9NXH3 145 aa17.53■□□□□ 0.4
HOXD9-201ENST00000249499 VPREB3Q9UKI3 123 aa17.53■□□□□ 0.4
HOXD9-201ENST00000249499 NAV2Q8IVL1 2488 aa17.53■□□□□ 0.4
HOXD9-201ENST00000249499 TEX15Q9BXT5 2789 aa17.52■□□□□ 0.4
HOXD9-201ENST00000249499 TRAV8-2A0A0B4J237 113 aa17.52■□□□□ 0.4
HOXD9-201ENST00000249499 ZNF207O43670 478 aaKnown RBP17.52■□□□□ 0.4
HOXD9-201ENST00000249499 GPX1P07203 203 aa17.52■□□□□ 0.4
HOXD9-201ENST00000249499 IGFL4Q6B9Z1 124 aa17.52■□□□□ 0.4
HOXD9-201ENST00000249499 Q6YL49 198 aa17.52■□□□□ 0.4
HOXD9-201ENST00000249499 MAPK1IP1LQ8NDC0 245 aa17.52■□□□□ 0.4
HOXD9-201ENST00000249499 BORCS7Q96B45 105 aa17.52■□□□□ 0.4
HOXD9-201ENST00000249499 SSBP4Q9BWG4 385 aaPredicted RBP17.52■□□□□ 0.4
HOXD9-201ENST00000249499 NPFFR1Q9GZQ6 430 aa17.52■□□□□ 0.4
HOXD9-201ENST00000249499 PSMB8P28062 276 aa17.52■□□□□ 0.39
HOXD9-201ENST00000249499 SIGLECL1Q8N7X8 197 aa17.52■□□□□ 0.39
HOXD9-201ENST00000249499 ASCL2Q99929 193 aa17.52■□□□□ 0.39
HOXD9-201ENST00000249499 DMRTA1Q5VZB9 504 aa17.51■□□□□ 0.39
HOXD9-201ENST00000249499 UNQ9165/PRO28630Q6UXU0 137 aa17.51■□□□□ 0.39
HOXD9-201ENST00000249499 VPS13CQ709C8 3753 aa17.51■□□□□ 0.39
HOXD9-201ENST00000249499 IGHV3OR16-13A0A075B7E8 117 aa17.5■□□□□ 0.39
HOXD9-201ENST00000249499 IGHV3-74A0A0B4J1X5 117 aa17.5■□□□□ 0.39
HOXD9-201ENST00000249499 RCHY1Q96PM5 261 aa17.5■□□□□ 0.39
HOXD9-201ENST00000249499 ZNF324O75467 553 aaPredicted RBP17.5■□□□□ 0.39
HOXD9-201ENST00000249499 IGHV3-11P01762 117 aa17.5■□□□□ 0.39
HOXD9-201ENST00000249499 Q8TAT8 98 aa17.5■□□□□ 0.39
HOXD9-201ENST00000249499 IGHV3-49A0A0A0MS15 119 aa17.49■□□□□ 0.39
HOXD9-201ENST00000249499 PRAC2D3DTV9 90 aa17.49■□□□□ 0.39
HOXD9-201ENST00000249499 SCGB1D1O95968 90 aa17.49■□□□□ 0.39
HOXD9-201ENST00000249499 CYB5R2Q6BCY4 276 aa17.49■□□□□ 0.39
HOXD9-201ENST00000249499 C9orf47Q6ZRZ4 202 aa17.49■□□□□ 0.39
HOXD9-201ENST00000249499 RNF182Q8N6D2 247 aa17.49■□□□□ 0.39
HOXD9-201ENST00000249499 Q96MF0 132 aa17.49■□□□□ 0.39
HOXD9-201ENST00000249499 PEF1Q9UBV8 284 aaKnown RBP17.49■□□□□ 0.39
HOXD9-201ENST00000249499 SVEP1Q4LDE5 3571 aa17.49■□□□□ 0.39
HOXD9-201ENST00000249499 LOC102724200A0A096LPH7 203 aaPredicted RBP17.48■□□□□ 0.39
HOXD9-201ENST00000249499 FABP5P3A8MUU1 101 aa17.48■□□□□ 0.39
HOXD9-201ENST00000249499 K7EMT4 169 aa17.48■□□□□ 0.39
HOXD9-201ENST00000249499 ARMS2P0C7Q2 107 aa17.48■□□□□ 0.39
HOXD9-201ENST00000249499 Q6ZWC4 215 aa17.48■□□□□ 0.39
HOXD9-201ENST00000249499 NAGKQ9UJ70 344 aa17.48■□□□□ 0.39
HOXD9-201ENST00000249499 ZNF493Q6ZR52 646 aa17.48■□□□□ 0.39
HOXD9-201ENST00000249499 C16orf92Q96LL3 132 aa17.48■□□□□ 0.39
HOXD9-201ENST00000249499 SMAD7O15105 426 aaKnown RBP17.47■□□□□ 0.39
HOXD9-201ENST00000249499 PRB4P10163 310 aaPredicted RBP17.47■□□□□ 0.39
HOXD9-201ENST00000249499 AMTP48728 403 aa17.47■□□□□ 0.39
HOXD9-201ENST00000249499 ZNF138P52744 262 aa17.47■□□□□ 0.39
HOXD9-201ENST00000249499 CTAG1AP78358 180 aa17.47■□□□□ 0.39
HOXD9-201ENST00000249499 TMEM78Q5T7P6 136 aa17.47■□□□□ 0.39
HOXD9-201ENST00000249499 KRTAP1-3Q8IUG1 177 aa17.47■□□□□ 0.39
HOXD9-201ENST00000249499 DAZ1Q9NQZ3 744 aaKnown RBP17.47■□□□□ 0.39
HOXD9-201ENST00000249499 LENEPQ9Y5L5 61 aa17.47■□□□□ 0.39
HOXD9-201ENST00000249499 MAP1AP78559 2803 aaPredicted RBP17.47■□□□□ 0.39
HOXD9-201ENST00000249499 GPHB5Q86YW7 130 aa17.46■□□□□ 0.39
HOXD9-201ENST00000249499 TEX29Q8N6K0 151 aa17.46■□□□□ 0.39
HOXD9-201ENST00000249499 AGPAT4-IT1Q9H0P7 198 aa17.46■□□□□ 0.39
HOXD9-201ENST00000249499 MAST4O15021 2626 aa17.46■□□□□ 0.39
HOXD9-201ENST00000249499 IGHV7-4-1A0A0J9YVY3 117 aa17.46■□□□□ 0.38
HOXD9-201ENST00000249499 CR1P17927 2039 aa17.46■□□□□ 0.38
HOXD9-201ENST00000249499 CTRLP40313 264 aa17.46■□□□□ 0.38
HOXD9-201ENST00000249499 ZNF80P51504 273 aaPredicted RBP17.46■□□□□ 0.38
HOXD9-201ENST00000249499 ERCC8Q13216 396 aa17.46■□□□□ 0.38
HOXD9-201ENST00000249499 FAM106AQ4KMX7 169 aa17.46■□□□□ 0.38
HOXD9-201ENST00000249499 CSPG4Q6UVK1 2322 aa17.46■□□□□ 0.38
HOXD9-201ENST00000249499 CCDC168Q8NDH2 2452 aa17.45■□□□□ 0.38
HOXD9-201ENST00000249499 LINC01559Q495D7 138 aa17.45■□□□□ 0.38
HOXD9-201ENST00000249499 PRRC2AP48634 2157 aaKnown RBP17.45■□□□□ 0.38
HOXD9-201ENST00000249499 SOCS3O14543 225 aa17.44■□□□□ 0.38
HOXD9-201ENST00000249499 HIST1H1AQ02539 215 aaPredicted RBP17.44■□□□□ 0.38
HOXD9-201ENST00000249499 AKAP9Q99996 3911 aa17.44■□□□□ 0.38
HOXD9-201ENST00000249499 IGLC6P0CF74 106 aa17.44■□□□□ 0.38
HOXD9-201ENST00000249499 TMEM95Q3KNT9 176 aa17.44■□□□□ 0.38
HOXD9-201ENST00000249499 SAMD13Q5VXD3 122 aa17.44■□□□□ 0.38
HOXD9-201ENST00000249499 LYZL1Q6UWQ5 148 aa17.44■□□□□ 0.38
HOXD9-201ENST00000249499 NRN1Q9NPD7 142 aa17.44■□□□□ 0.38
HOXD9-201ENST00000249499 ELANEP08246 267 aa17.43■□□□□ 0.38
HOXD9-201ENST00000249499 FOXE3Q13461 319 aa17.43■□□□□ 0.38
HOXD9-201ENST00000249499 LCNL1Q6ZST4 164 aa17.43■□□□□ 0.38
HOXD9-201ENST00000249499 IL17RELQ6ZVW7 336 aa17.43■□□□□ 0.38
HOXD9-201ENST00000249499 CHCHD1Q96BP2 118 aaKnown RBP17.43■□□□□ 0.38
HOXD9-201ENST00000249499 OVOL1O14753 267 aa17.42■□□□□ 0.38
HOXD9-201ENST00000249499 HSBP1O75506 76 aa17.42■□□□□ 0.38
HOXD9-201ENST00000249499 PMCHP20382 165 aa17.42■□□□□ 0.38
HOXD9-201ENST00000249499 ZNF664Q8N3J9 261 aa17.42■□□□□ 0.38
HOXD9-201ENST00000249499 FER1L6-AS1Q8NA97 138 aa17.42■□□□□ 0.38
HOXD9-201ENST00000249499 DDTP30046 118 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 MYOZ3Q8TDC0 251 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 LINC00477Q96M19 166 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 RHPN1-AS1Q9BWJ2 59 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 CNFNQ9BYD5 112 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 PRO1933Q9H354 126 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 SMPXQ9UHP9 88 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 UFC1Q9Y3C8 167 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 MYO9AB2RTY4 2548 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 ZNF702PQ9H963 129 aa17.41■□□□□ 0.38
HOXD9-201ENST00000249499 TMSB15BA0A087X1C1 80 aa17.4■□□□□ 0.38
HOXD9-201ENST00000249499 ZNF705DP0CH99 300 aaPredicted RBP17.4■□□□□ 0.38
HOXD9-201ENST00000249499 ZNF705BP0CI00 300 aaPredicted RBP17.4■□□□□ 0.38
HOXD9-201ENST00000249499 DEFA6Q01524 100 aa17.4■□□□□ 0.38
HOXD9-201ENST00000249499 RNF152Q8N8N0 203 aa17.4■□□□□ 0.38
HOXD9-201ENST00000249499 TPPP3Q9BW30 176 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms