RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 VAMP8Q9BV40 100 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 C16orf95Q9H693 158 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 TMEM89A2RUT3 159 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 BUB3O43684 328 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 LGALS1P09382 135 aaKnown RBP9.85□□□□□ -0.83
HIF3A-201ENST00000244302 NBEAP1P0C6P0 100 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 SYNJ2BPP57105 145 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 OR5I1Q13606 314 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 IBA57Q5T440 356 aaKnown RBP9.85□□□□□ -0.83
HIF3A-201ENST00000244302 EXOC3-AS1Q8N2X6 119 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 OR11H1Q8NG94 326 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 OR4B1Q8NGF8 309 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 KCNS1Q96KK3 526 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 LINC00479Q96M42 142 aa9.85□□□□□ -0.83
HIF3A-201ENST00000244302 GPX1P07203 203 aa9.84□□□□□ -0.83
HIF3A-201ENST00000244302 HLA-DMBP28068 263 aa9.84□□□□□ -0.83
HIF3A-201ENST00000244302 PROK1P58294 105 aa9.84□□□□□ -0.83
HIF3A-201ENST00000244302 GNG5P63218 68 aa9.84□□□□□ -0.83
HIF3A-201ENST00000244302 RELQ04864 619 aaPredicted RBP9.84□□□□□ -0.83
HIF3A-201ENST00000244302 FAM231DQ6ZW35 169 aa9.84□□□□□ -0.83
HIF3A-201ENST00000244302 KLHL30-AS1Q8NEE0 82 aa9.84□□□□□ -0.83
HIF3A-201ENST00000244302 SGK494Q96LW2 274 aa9.84□□□□□ -0.83
HIF3A-201ENST00000244302 IGKV3-7A0A075B6H7 116 aa9.83□□□□□ -0.84
HIF3A-201ENST00000244302 IZUMO1RA6ND01 250 aa9.83□□□□□ -0.84
HIF3A-201ENST00000244302 IGLV2-8P01709 118 aa9.83□□□□□ -0.84
HIF3A-201ENST00000244302 HOXD3P31249 432 aaPredicted RBP9.83□□□□□ -0.84
HIF3A-201ENST00000244302 ZNF124Q15973 351 aa9.83□□□□□ -0.84
HIF3A-201ENST00000244302 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.83□□□□□ -0.84
HIF3A-201ENST00000244302 NDUFA4O00483 81 aa9.83□□□□□ -0.84
HIF3A-201ENST00000244302 IGLC2P0DOY2 106 aa9.83□□□□□ -0.84
HIF3A-201ENST00000244302 ZNF705AQ6ZN79 300 aaPredicted RBP9.83□□□□□ -0.84
HIF3A-201ENST00000244302 JMJD8Q96S16 334 aa9.83□□□□□ -0.84
HIF3A-201ENST00000244302 ASCL2Q99929 193 aa9.83□□□□□ -0.84
HIF3A-201ENST00000244302 RNASE7Q9H1E1 156 aaKnown RBP9.83□□□□□ -0.84
HIF3A-201ENST00000244302 NOTCH3Q9UM47 2321 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 TMEM190Q8WZ59 177 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 U3KQE9 123 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 STAB1Q9NY15 2570 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 PGPA6NDG6 321 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 BPIFA4PQ86YQ2 179 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 SMIM12Q96EX1 92 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 METTL26Q96S19 204 aa9.82□□□□□ -0.84
HIF3A-201ENST00000244302 M0R3E3 92 aa9.81□□□□□ -0.84
HIF3A-201ENST00000244302 ZNF253O75346 499 aa9.81□□□□□ -0.84
HIF3A-201ENST00000244302 SCGB2A1O75556 95 aa9.81□□□□□ -0.84
HIF3A-201ENST00000244302 NDUFA7O95182 113 aa9.81□□□□□ -0.84
HIF3A-201ENST00000244302 ADAMTSL5Q6ZMM2 481 aa9.81□□□□□ -0.84
HIF3A-201ENST00000244302 ATP6V0BQ99437 205 aa9.81□□□□□ -0.84
HIF3A-201ENST00000244302 ZNF331Q9NQX6 463 aaPredicted RBP9.81□□□□□ -0.84
HIF3A-201ENST00000244302 RPH3ALQ9UNE2 315 aa9.81□□□□□ -0.84
HIF3A-201ENST00000244302 TRBV19A0A075B6N1 114 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 TRAV34A0A0B4J273 112 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 TMEM213A2RRL7 107 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 ZNF324O75467 553 aaPredicted RBP9.8□□□□□ -0.84
HIF3A-201ENST00000244302 HIST1H1EP10412 219 aaKnown RBP9.8□□□□□ -0.84
HIF3A-201ENST00000244302 MGST1P10620 155 aaKnown RBP9.8□□□□□ -0.84
HIF3A-201ENST00000244302 MYCNOSP40205 109 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 AMTP48728 403 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 NSUN5P1Q3KNT7 163 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 GPHB5Q86YW7 130 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 STXBP6Q8NFX7 210 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 OR1N2Q8NGR9 330 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 DLX4Q92988 240 aaPredicted RBP9.8□□□□□ -0.84
HIF3A-201ENST00000244302 Q9H3A6 140 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 DIRC3C9JPN6 131 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 F2Z2F3 143 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 APCSP02743 223 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 DEFB1P60022 68 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 GAGE1Q13065 139 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 GRAMD2BQ96HH9 432 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 RHPN1-AS1Q9BWJ2 59 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 NRN1Q9NPD7 142 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 PAM16Q9Y3D7 125 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 COL6A5A8TX70 2615 aa9.8□□□□□ -0.84
HIF3A-201ENST00000244302 A0A1W2PS18 150 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 PEX7O00628 323 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 FRMD6-AS1P0C7T7 363 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 SRIP30626 198 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 KLF5Q13887 457 aaPredicted RBP9.79□□□□□ -0.84
HIF3A-201ENST00000244302 FAM106AQ4KMX7 169 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 PRIMA1Q86XR5 153 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 RNF182Q8N6D2 247 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 C4orf3Q8WVX3 66 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 CHEK1O14757 476 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 KRTDAPP60985 99 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 C16orf54Q6UWD8 224 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 SIGLEC15Q6ZMC9 328 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 ATP5L2Q7Z4Y8 100 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 Q8N976 141 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 NHLRC2Q8NBF2 726 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 OR4F17Q8NGA8 305 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 GLMPQ8WWB7 406 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 ATG101Q9BSB4 218 aa9.79□□□□□ -0.84
HIF3A-201ENST00000244302 DAZ1Q9NQZ3 744 aaKnown RBP9.79□□□□□ -0.84
HIF3A-201ENST00000244302 IGHV7-4-1A0A0J9YVY3 117 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms