RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.73□□□□□ -0.69
NEK9-201ENST00000238616 HIST1H2BHQ93079 126 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 HIST1H2BNQ99877 126 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 HIST1H2BMQ99879 126 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 A0A0A6YYD4 124 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 BUB3O43684 328 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 TRACP01848 142 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 SMPXQ9UHP9 88 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 PTPRSQ13332 1948 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 A0A087WV48 116 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 RNF126Q9BV68 326 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 I3L3M4 83 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 MRPL14Q6P1L8 145 aaKnown RBP10.73□□□□□ -0.69
NEK9-201ENST00000238616 MESP1Q9BRJ9 268 aa10.73□□□□□ -0.69
NEK9-201ENST00000238616 C9orf139Q6ZV77 190 aa10.72□□□□□ -0.69
NEK9-201ENST00000238616 RPRMLQ8N4K4 120 aa10.72□□□□□ -0.69
NEK9-201ENST00000238616 CHAC1Q9BUX1 264 aa10.72□□□□□ -0.69
NEK9-201ENST00000238616 LINC01549A6NIU2 74 aa10.72□□□□□ -0.69
NEK9-201ENST00000238616 WISP3O95389 354 aaPredicted RBP10.72□□□□□ -0.69
NEK9-201ENST00000238616 PRR30Q53SZ7 412 aaPredicted RBP10.72□□□□□ -0.69
NEK9-201ENST00000238616 CD200R1LQ6Q8B3 271 aa10.72□□□□□ -0.69
NEK9-201ENST00000238616 RPP25LQ8N5L8 163 aaKnown RBP10.72□□□□□ -0.69
NEK9-201ENST00000238616 RNASE2P10153 161 aaKnown RBP10.72□□□□□ -0.69
NEK9-201ENST00000238616 HEPN1Q6WQI6 88 aa10.72□□□□□ -0.69
NEK9-201ENST00000238616 CD177Q8N6Q3 437 aa10.72□□□□□ -0.69
NEK9-201ENST00000238616 ARMS2P0C7Q2 107 aa10.71□□□□□ -0.69
NEK9-201ENST00000238616 LINC00271P0C7V0 271 aa10.71□□□□□ -0.69
NEK9-201ENST00000238616 STPG4Q8N801 248 aa10.71□□□□□ -0.69
NEK9-201ENST00000238616 NOP10Q9NPE3 64 aaKnown RBP10.71□□□□□ -0.69
NEK9-201ENST00000238616 NBL1P41271 181 aa10.71□□□□□ -0.69
NEK9-201ENST00000238616 IFITM2Q01629 132 aa10.71□□□□□ -0.69
NEK9-201ENST00000238616 PRSS57Q6UWY2 283 aa10.71□□□□□ -0.69
NEK9-201ENST00000238616 AGMATQ9BSE5 352 aa10.71□□□□□ -0.69
NEK9-201ENST00000238616 RSPO3Q9BXY4 272 aaPredicted RBP10.71□□□□□ -0.69
NEK9-201ENST00000238616 TMEM242Q9NWH2 141 aa10.71□□□□□ -0.69
NEK9-201ENST00000238616 GLRX5Q86SX6 157 aa10.71□□□□□ -0.7
NEK9-201ENST00000238616 CSRP1P21291 193 aaKnown RBP10.71□□□□□ -0.7
NEK9-201ENST00000238616 HLA-DRB4P13762 266 aa10.71□□□□□ -0.7
NEK9-201ENST00000238616 MST1LQ2TV78 715 aa10.71□□□□□ -0.7
NEK9-201ENST00000238616 HLA-DRB4X5D2U9 266 aa10.71□□□□□ -0.7
NEK9-201ENST00000238616 CRYGCP07315 174 aa10.7□□□□□ -0.7
NEK9-201ENST00000238616 ATRAIDQ6UW56 229 aa10.7□□□□□ -0.7
NEK9-201ENST00000238616 ATP6V0E1O15342 81 aa10.7□□□□□ -0.7
NEK9-201ENST00000238616 ADAMTSL5Q6ZMM2 481 aa10.7□□□□□ -0.7
NEK9-201ENST00000238616 IGKV1-16P04430 117 aa10.7□□□□□ -0.7
NEK9-201ENST00000238616 CD59P13987 128 aa10.7□□□□□ -0.7
NEK9-201ENST00000238616 C14orf132Q9NPU4 83 aa10.7□□□□□ -0.7
NEK9-201ENST00000238616 THSD7AQ9UPZ6 1657 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 A0A1W2PPI3 338 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 LINC00479Q96M42 142 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 WFDC1Q9HC57 220 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 ZNF503Q96F45 646 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 BDP1A6H8Y1 2624 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 ID3Q02535 119 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 C5orf24Q7Z6I8 188 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 A0A1B0GTI1 187 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 IGLV3-21P80748 117 aaPredicted RBP10.69□□□□□ -0.7
NEK9-201ENST00000238616 PLSCR4Q9NRQ2 329 aa10.69□□□□□ -0.7
NEK9-201ENST00000238616 CFHR4Q92496 578 aa10.68□□□□□ -0.7
NEK9-201ENST00000238616 E7EQL1 145 aa10.68□□□□□ -0.7
NEK9-201ENST00000238616 C8orf31Q8N9H6 132 aa10.68□□□□□ -0.7
NEK9-201ENST00000238616 IGKV1-9A0A0C4DH69 117 aa10.68□□□□□ -0.7
NEK9-201ENST00000238616 GGNQ86UU5 652 aa10.68□□□□□ -0.7
NEK9-201ENST00000238616 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
NEK9-201ENST00000238616 RFNGQ9Y644 331 aa10.68□□□□□ -0.7
NEK9-201ENST00000238616 SRRM5B3KS81 715 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 MLANAQ16655 118 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 LINC01559Q495D7 138 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 HIST1H2BLQ99880 126 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 G3V318 75 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 SYS1-DBNDD2H3BUS1 97 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 IGFBP3P17936 291 aaPredicted RBP10.67□□□□□ -0.7
NEK9-201ENST00000238616 CARHSP1Q9Y2V2 147 aaKnown RBP10.67□□□□□ -0.7
NEK9-201ENST00000238616 IL18BPO95998 194 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 NEGR1Q7Z3B1 354 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 GAFA1Q96PS6 74 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 SHISA9B4DS77 424 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 IGLV10-54A0A075B6I4 117 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 CXCL1P09341 107 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 FGF6P10767 208 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 NTF4P34130 210 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 SEM1Q6ZVN7 128 aa10.67□□□□□ -0.7
NEK9-201ENST00000238616 GREM1O60565 184 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 EIF4EBP2Q13542 120 aaPredicted RBP10.66□□□□□ -0.7
NEK9-201ENST00000238616 RBM3P98179 157 aaKnown RBP10.66□□□□□ -0.7
NEK9-201ENST00000238616 CR1LQ2VPA4 569 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 COL4A1P02462 1669 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 IGKV1D-8A0A087WSZ0 117 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 DEFB136Q30KP8 78 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 TEX36Q5VZQ5 186 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 FBLIM1Q8WUP2 373 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 IFI6P09912 130 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 CDKN1BP46527 198 aa10.66□□□□□ -0.7
NEK9-201ENST00000238616 GATA3P23771 443 aa10.65□□□□□ -0.7
NEK9-201ENST00000238616 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
NEK9-201ENST00000238616 RNF222A6NCQ9 220 aa10.65□□□□□ -0.7
NEK9-201ENST00000238616 LINC00473A8K010 186 aa10.65□□□□□ -0.7
NEK9-201ENST00000238616 NEUROG3Q9Y4Z2 214 aa10.65□□□□□ -0.7
NEK9-201ENST00000238616 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms