RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ZNF705BP0CI00 300 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 SMDT1Q9H4I9 107 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 TIMM8BQ9Y5J9 83 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 ORM1P02763 201 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 A0A087X0K7 114 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 K7EQG2 157 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 TCRAP04437 139 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 HLA-DMBP28068 263 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 TPPP3Q9BW30 176 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 SMCO4Q9NRQ5 59 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 GOLT1BQ9Y3E0 138 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
TNFAIP3-201ENST00000237289 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 ZNF138P52744 262 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 WFDC9Q8NEX5 89 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 FMC1Q96HJ9 113 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 LINC01587Q99440 93 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 YTHDF2Q9Y5A9 579 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 SCO2A0A1W2PP80 73 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 SLC17A3O00476 420 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 CD7P09564 240 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 IGLC2P0DOY2 106 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 FXYD7P58549 80 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 FABP9Q0Z7S8 132 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 PRO1933Q9H354 126 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 PSG8Q9UQ74 426 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 TMEM241Q24JQ0 296 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 UQCC3Q6UW78 93 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 MRAPQ8TCY5 172 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 LINC00862A6NCI5 91 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 IZUMO1RA6ND01 250 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 MAP6D1Q9H9H5 199 aa8.38□□□□□ -1.07
TNFAIP3-201ENST00000237289 LOC102724200A0A096LPH7 203 aaPredicted RBP8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 F6UB75 175 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 TMEM250H0YL14 139 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 MRPL53Q96EL3 112 aaKnown RBP8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 ERVFC1-1P60608 527 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 LINC00518Q8N0U6 118 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 DEFB125Q8N687 156 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 DIRC3C9JPN6 131 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 CA1P00915 261 aaPredicted RBP8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 SFTA3P0C7M3 94 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 ERCC8Q13216 396 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 FAM159AQ6UWV7 190 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 XCL2Q9UBD3 114 aa8.37□□□□□ -1.07
TNFAIP3-201ENST00000237289 PHOX2AO14813 284 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 AMBPP02760 352 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 STAB1Q9NY15 2570 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 CELSR1Q9NYQ6 3014 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 NHLRC2Q8NBF2 726 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 ISOC2Q96AB3 205 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 ZFP30Q9Y2G7 519 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 G3V4G9 280 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 PPP1R2P9O14990 202 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 INSP01308 110 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 TAS2R60P59551 318 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 FRZBQ92765 325 aa8.36□□□□□ -1.07
TNFAIP3-201ENST00000237289 GCGP01275 180 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 P01737 135 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 SSTP61278 116 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 SPINK13Q1W4C9 94 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 Q8TAT8 98 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 TRAV8-1A0A0A6YYK1 113 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 GGTLC3B5MD39 225 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 MT-ND4LP03901 98 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 PARLQ9H300 379 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 AURKAIP1Q9NWT8 199 aaPredicted RBP8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 NAT8Q9UHE5 227 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 S100A8P05109 93 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 CENPWQ5EE01 88 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 PLA2G2EQ9NZK7 142 aa8.35□□□□□ -1.07
TNFAIP3-201ENST00000237289 SMIM15Q7Z3B0 74 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 TVP23CQ96ET8 276 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 GATCO43716 136 aaKnown RBP8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 PRB2P02812 416 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 MORN3Q6PF18 240 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 CSTL1Q9H114 145 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 ZMAT4Q9H898 229 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 TMSB15BA0A087X1C1 80 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 TRAV21A0A0B4J279 112 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 CDKN1BP46527 198 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 RRN3P1Q2M238 152 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 ZNF503Q96F45 646 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 ASCL2Q99929 193 aa8.34□□□□□ -1.07
TNFAIP3-201ENST00000237289 CBY3A6NI87 242 aa8.34□□□□□ -1.08
TNFAIP3-201ENST00000237289 ZNF705AQ6ZN79 300 aaPredicted RBP8.34□□□□□ -1.08
TNFAIP3-201ENST00000237289 DCANP1Q8TF63 244 aa8.34□□□□□ -1.08
TNFAIP3-201ENST00000237289 TRAV12-3A0A0B4J271 114 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 SCGB1D1O95968 90 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 RNF212Q495C1 297 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 FAM24BQ8N5W8 94 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 MXRA5Q9NR99 2828 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 FABP5P3A8MUU1 101 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 TMEM189A5PLL7 270 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 EMP1P54849 157 aa8.33□□□□□ -1.08
TNFAIP3-201ENST00000237289 DEFB1P60022 68 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms