RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 RBPMS2Q6ZRY4 209 aaKnown RBP12.23□□□□□ -0.45
ITGA4-201ENST00000233573 LCNL1Q6ZST4 164 aa12.23□□□□□ -0.45
ITGA4-201ENST00000233573 TMEM18Q96B42 140 aa12.23□□□□□ -0.45
ITGA4-201ENST00000233573 PRR25Q96S07 402 aa12.23□□□□□ -0.45
ITGA4-201ENST00000233573 IGHV3-11P01762 117 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 GZMBP10144 247 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 OR4X2Q8NGF9 303 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 GLMPQ8WWB7 406 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 SERF1AO75920 110 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 SAPCD1Q5SSQ6 148 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 PGLYRP4Q96LB8 373 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 PRDM13Q9H4Q3 707 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 VPREB3Q9UKI3 123 aa12.22□□□□□ -0.45
ITGA4-201ENST00000233573 OTOGQ6ZRI0 2925 aa12.21□□□□□ -0.45
ITGA4-201ENST00000233573 A0A0G2JLM5 398 aa12.21□□□□□ -0.45
ITGA4-201ENST00000233573 PRAC2D3DTV9 90 aa12.21□□□□□ -0.45
ITGA4-201ENST00000233573 PSMB8P28062 276 aa12.21□□□□□ -0.45
ITGA4-201ENST00000233573 HBBP68871 147 aa12.21□□□□□ -0.45
ITGA4-201ENST00000233573 JOSD1Q15040 202 aaPredicted RBP12.21□□□□□ -0.45
ITGA4-201ENST00000233573 OR10J3Q5JRS4 329 aa12.21□□□□□ -0.45
ITGA4-201ENST00000233573 RNF182Q8N6D2 247 aa12.21□□□□□ -0.45
ITGA4-201ENST00000233573 RBAKDNA6NC62 111 aa12.2□□□□□ -0.46
ITGA4-201ENST00000233573 SRIP30626 198 aa12.2□□□□□ -0.46
ITGA4-201ENST00000233573 SIGLECL1Q8N7X8 197 aa12.2□□□□□ -0.46
ITGA4-201ENST00000233573 A8MWP6 167 aa12.2□□□□□ -0.46
ITGA4-201ENST00000233573 CAMPP49913 170 aa12.2□□□□□ -0.46
ITGA4-201ENST00000233573 C8orf86Q6ZUL3 223 aa12.2□□□□□ -0.46
ITGA4-201ENST00000233573 Q8TAT8 98 aa12.2□□□□□ -0.46
ITGA4-201ENST00000233573 CT45A10P0DMU9 189 aa12.19□□□□□ -0.46
ITGA4-201ENST00000233573 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
ITGA4-201ENST00000233573 SSBP4Q9BWG4 385 aaPredicted RBP12.19□□□□□ -0.46
ITGA4-201ENST00000233573 HAX1O00165 279 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 SH2D1AO60880 128 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 BAGE3Q86Y29 109 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 YAE1D1Q9NRH1 226 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 TMEM89A2RUT3 159 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 CD5LO43866 347 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
ITGA4-201ENST00000233573 FAM162BQ5T6X4 162 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 GPHB5Q86YW7 130 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 SMR3AQ99954 134 aa12.18□□□□□ -0.46
ITGA4-201ENST00000233573 ERCC8Q13216 396 aa12.17□□□□□ -0.46
ITGA4-201ENST00000233573 C10orf99Q6UWK7 81 aa12.17□□□□□ -0.46
ITGA4-201ENST00000233573 C18orf32Q8TCD1 76 aa12.17□□□□□ -0.46
ITGA4-201ENST00000233573 RCHY1Q96PM5 261 aa12.17□□□□□ -0.46
ITGA4-201ENST00000233573 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
ITGA4-201ENST00000233573 NPFFR1Q9GZQ6 430 aa12.17□□□□□ -0.46
ITGA4-201ENST00000233573 PAFAH1B2P68402 229 aa12.17□□□□□ -0.46
ITGA4-201ENST00000233573 KLF5Q13887 457 aaPredicted RBP12.17□□□□□ -0.46
ITGA4-201ENST00000233573 ZNF575Q86XF7 245 aa12.17□□□□□ -0.46
ITGA4-201ENST00000233573 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
ITGA4-201ENST00000233573 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
ITGA4-201ENST00000233573 MTORP42345 2549 aa12.16□□□□□ -0.46
ITGA4-201ENST00000233573 SOCS3O14543 225 aa12.15□□□□□ -0.46
ITGA4-201ENST00000233573 Q6AWC8 147 aa12.15□□□□□ -0.46
ITGA4-201ENST00000233573 AGPAT4-IT1Q9H0P7 198 aa12.15□□□□□ -0.46
ITGA4-201ENST00000233573 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.46
ITGA4-201ENST00000233573 A0A1B0GUT8 65 aa12.15□□□□□ -0.46
ITGA4-201ENST00000233573 ARMS2P0C7Q2 107 aa12.15□□□□□ -0.46
ITGA4-201ENST00000233573 PRR31Q5SQ13 230 aa12.15□□□□□ -0.46
ITGA4-201ENST00000233573 CLEC5AQ9NY25 188 aa12.15□□□□□ -0.46
ITGA4-201ENST00000233573 TMEM189A5PLL7 270 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 SRSF2Q01130 221 aaKnown RBP12.14□□□□□ -0.47
ITGA4-201ENST00000233573 MYOZ3Q8TDC0 251 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 C20orf173Q96LM9 149 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 PPP1R14DQ9NXH3 145 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 NF1P21359 2839 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 IGHV7-4-1A0A0J9YVY3 117 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 A0A1W2PS18 150 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 C9orf47Q6ZRZ4 202 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 Q6ZWC4 215 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 KCNS1Q96KK3 526 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
ITGA4-201ENST00000233573 K7EMT4 169 aa12.13□□□□□ -0.47
ITGA4-201ENST00000233573 GPX1P07203 203 aa12.13□□□□□ -0.47
ITGA4-201ENST00000233573 BMI1P35226 326 aa12.13□□□□□ -0.47
ITGA4-201ENST00000233573 TM4SF20Q53R12 229 aa12.13□□□□□ -0.47
ITGA4-201ENST00000233573 C16orf92Q96LL3 132 aa12.13□□□□□ -0.47
ITGA4-201ENST00000233573 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
ITGA4-201ENST00000233573 SSTP61278 116 aa12.12□□□□□ -0.47
ITGA4-201ENST00000233573 LOC102724200A0A096LPH7 203 aaPredicted RBP12.12□□□□□ -0.47
ITGA4-201ENST00000233573 A0A1B0GW15 77 aa12.12□□□□□ -0.47
ITGA4-201ENST00000233573 RPLP1P05386 114 aaKnown RBP12.12□□□□□ -0.47
ITGA4-201ENST00000233573 RIGQ13278 110 aa12.12□□□□□ -0.47
ITGA4-201ENST00000233573 RHPN1-AS1Q9BWJ2 59 aa12.12□□□□□ -0.47
ITGA4-201ENST00000233573 SMPXQ9UHP9 88 aa12.12□□□□□ -0.47
ITGA4-201ENST00000233573 TMSB15BA0A087X1C1 80 aa12.11□□□□□ -0.47
ITGA4-201ENST00000233573 ZNF138P52744 262 aa12.11□□□□□ -0.47
ITGA4-201ENST00000233573 DEFA6Q01524 100 aa12.11□□□□□ -0.47
ITGA4-201ENST00000233573 FOXE3Q13461 319 aa12.11□□□□□ -0.47
ITGA4-201ENST00000233573 LYZL1Q6UWQ5 148 aa12.11□□□□□ -0.47
ITGA4-201ENST00000233573 Q8N2B8 174 aa12.11□□□□□ -0.47
ITGA4-201ENST00000233573 DNAJC9-AS1A6NH13 148 aa12.1□□□□□ -0.47
ITGA4-201ENST00000233573 FABP5P3A8MUU1 101 aa12.1□□□□□ -0.47
ITGA4-201ENST00000233573 IGLC6P0CF74 106 aa12.1□□□□□ -0.47
ITGA4-201ENST00000233573 EDN2P20800 178 aa12.1□□□□□ -0.47
ITGA4-201ENST00000233573 RPS20P60866 119 aaKnown RBP12.1□□□□□ -0.47
ITGA4-201ENST00000233573 ZNF493Q6ZR52 646 aa12.1□□□□□ -0.47
ITGA4-201ENST00000233573 TEX29Q8N6K0 151 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms