RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 U3KQA8 63 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 ETV2O00321 342 aaPredicted RBP10.67□□□□□ -0.7
NEK4-201ENST00000233027 LINC01356Q8N9X3 169 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 PMVKQ15126 192 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 Q8TCH9 128 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 FXYD5Q96DB9 178 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 PRR25Q96S07 402 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 COX8AP10176 69 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 DTX1Q86Y01 620 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 I3L3M4 83 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 NLRC5Q86WI3 1866 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 TMEM141Q96I45 108 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 LOXP28300 417 aaPredicted RBP10.67□□□□□ -0.7
NEK4-201ENST00000233027 MORN5Q5VZ52 161 aa10.67□□□□□ -0.7
NEK4-201ENST00000233027 PFN2P35080 140 aa10.66□□□□□ -0.7
NEK4-201ENST00000233027 UBE2E1P51965 193 aa10.66□□□□□ -0.7
NEK4-201ENST00000233027 BVES-AS1Q5T3Y7 98 aa10.66□□□□□ -0.7
NEK4-201ENST00000233027 C17orf77Q96MU5 243 aa10.66□□□□□ -0.7
NEK4-201ENST00000233027 OVOL2Q9BRP0 275 aa10.66□□□□□ -0.7
NEK4-201ENST00000233027 DOCK11Q5JSL3 2073 aa10.66□□□□□ -0.7
NEK4-201ENST00000233027 HEATR1Q9H583 2144 aaKnown RBP10.66□□□□□ -0.7
NEK4-201ENST00000233027 MRPL35Q9NZE8 188 aaKnown RBP10.66□□□□□ -0.7
NEK4-201ENST00000233027 WDR81Q562E7 1941 aa10.66□□□□□ -0.7
NEK4-201ENST00000233027 PLXNA2O75051 1894 aa10.66□□□□□ -0.7
NEK4-201ENST00000233027 RNF223E7ERA6 249 aa10.65□□□□□ -0.7
NEK4-201ENST00000233027 FAM231DQ6ZW35 169 aa10.65□□□□□ -0.7
NEK4-201ENST00000233027 CEND1Q8N111 149 aa10.65□□□□□ -0.7
NEK4-201ENST00000233027 SDHAF1A6NFY7 115 aa10.65□□□□□ -0.7
NEK4-201ENST00000233027 GATA4P43694 442 aa10.65□□□□□ -0.7
NEK4-201ENST00000233027 FAM120AOSQ5T036 256 aa10.65□□□□□ -0.7
NEK4-201ENST00000233027 K7EP34 96 aa10.65□□□□□ -0.7
NEK4-201ENST00000233027 RNASE13Q5GAN3 156 aaKnown RBP10.65□□□□□ -0.7
NEK4-201ENST00000233027 DKK2Q9UBU2 259 aa10.65□□□□□ -0.71
NEK4-201ENST00000233027 CACNA1EQ15878 2313 aa10.65□□□□□ -0.71
NEK4-201ENST00000233027 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 HLA-DMBP28068 263 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 IGFBPL1Q8WX77 278 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 AZU1P20160 251 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 ETDBQ3ZM63 59 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 DEFB121Q5J5C9 76 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 FGF6P10767 208 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 Q6ZVH6 145 aa10.64□□□□□ -0.71
NEK4-201ENST00000233027 K7EP13 123 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 DNAJC30Q96LL9 226 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 C1QTNF4Q9BXJ3 329 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 TMEM14CQ9P0S9 112 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 MSMBP08118 114 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 IGHV1OR15-1A0A075B7D0 117 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 A0A1W2PPM0 123 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 IGLV3-9A0A075B6K5 115 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 LINC01619G3V211 115 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
NEK4-201ENST00000233027 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 PSCAO43653 123 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 ZNRF2Q8NHG8 242 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 RNF166Q96A37 237 aaPredicted RBP10.62□□□□□ -0.71
NEK4-201ENST00000233027 C9orf153Q5TBE3 101 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 THAP8Q8NA92 274 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 HEATR5AQ86XA9 2040 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 H3BMG7 143 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 IGLV3-1P01715 115 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 NDUFS7O75251 213 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 HLA-DRB4P13762 266 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 GAGE6Q13070 117 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 HLA-DRB4X5D2U9 266 aa10.62□□□□□ -0.71
NEK4-201ENST00000233027 F8WEM9 126 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 CDK2AP2O75956 126 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 GAGE7O76087 117 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 GAGE12FP0CL80 117 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 GAGE12GP0CL81 117 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 GAGE12IP0CL82 117 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 LTAP01374 205 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 IGLC1P0CG04 106 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 TRBV25-1A0A075B6N4 114 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 VOPP1Q96AW1 172 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 SPRY2O43597 315 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 NXPH4O95158 308 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 MYO7BQ6PIF6 2116 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 F8W1H4 67 aa10.61□□□□□ -0.71
NEK4-201ENST00000233027 C11orf52Q96A22 123 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 IL15RAQ13261 267 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 AMTNQ6UX39 209 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 SOCS3O14543 225 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 UNQ6494/PRO21346Q6UXR6 183 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 PPDPFLQ8WWR9 84 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 TRBV20-1A0A075B6N2 111 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 SPRNQ5BIV9 151 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 OR11H6Q8NGC7 330 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 NDUFA12Q9UI09 145 aa10.6□□□□□ -0.71
NEK4-201ENST00000233027 CDKN1BP46527 198 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 PRR20EP86478 221 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 PRR20CP86479 221 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 PRR20DP86480 221 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 PRR20BP86481 221 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 PRR20AP86496 221 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 LINC00311Q8N616 119 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms