RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 A0A1B0GW15 77 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 C19orf71A6NCJ1 209 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 LYZP61626 148 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 C17orf77Q96MU5 243 aa7.43□□□□□ -1.22
HLA-DOA-201ENST00000229829 FAM90A27PA6NNH2 459 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 TRGV9Q99603 122 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 TMEM133Q9H2Q1 129 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 FBXL15Q9H469 300 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 SIGLEC9Q9Y336 463 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 ZFHX3Q15911 3703 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 C8orf86Q6ZUL3 223 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 BOD1L2Q8IYS8 172 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 PRELID3AQ96N28 172 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 CYSLTR1Q9Y271 337 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 ZNF785A8K8V0 405 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 E7EQL1 145 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 NPIPB6E9PJ23 425 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 PSMB2P49721 201 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 C8orf46Q8TAG6 207 aa7.42□□□□□ -1.22
HLA-DOA-201ENST00000229829 IGKV2D-26A0A0A0MRZ7 120 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 TEX22C9J3V5 150 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 CRYGBP07316 175 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 FGF6P10767 208 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 COX7A1P24310 79 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 RIGQ13278 110 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 FOXC2Q99958 501 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 DYNLRB1Q9NP97 96 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 TMEM213A2RRL7 107 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 PRSS29PA6NIE9 313 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 IGLV2-11P01706 119 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 CKS2P33552 79 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 PVRIGQ6DKI7 326 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 PPP1R27Q86WC6 154 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 C8orf31Q8N9H6 132 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 FMC1Q96HJ9 113 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 PSG8Q9UQ74 426 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 S4R3C0 116 aa7.41□□□□□ -1.22
HLA-DOA-201ENST00000229829 IGHV1-3A0A0C4DH29 117 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 PRRG2O14669 202 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 RBP4P02753 201 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 SLC25A39Q9BZJ4 359 aaPredicted RBP7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 HIGD1AQ9Y241 93 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 SHISA9B4DS77 424 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 OVOL3O00110 214 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 IGLV1-47P01700 117 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 EVI2AP22794 236 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 ZC2HC1BQ5TFG8 222 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
HLA-DOA-201ENST00000229829 HRNRQ86YZ3 2850 aaPredicted RBP7.4□□□□□ -1.23
HLA-DOA-201ENST00000229829 PRR30Q53SZ7 412 aaPredicted RBP7.4□□□□□ -1.23
HLA-DOA-201ENST00000229829 Q86TA4 180 aa7.4□□□□□ -1.23
HLA-DOA-201ENST00000229829 SPXQ9BT56 116 aa7.4□□□□□ -1.23
HLA-DOA-201ENST00000229829 KLK15Q9H2R5 256 aa7.4□□□□□ -1.23
HLA-DOA-201ENST00000229829 ANKHD1Q8IWZ3 2542 aaKnown RBP7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 IGLL5B9A064 214 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 PRTN3P24158 256 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 SIGLEC8Q9NYZ4 499 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 F8W1H4 67 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 BUB1B-PAK6H3BSN5 160 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 IGKV1-17P01599 117 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 HBDP02042 147 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 ARL3P36405 182 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 KLF17Q5JT82 389 aaPredicted RBP7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 CITED2Q99967 270 aaPredicted RBP7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 ZNF492Q9P255 531 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 KAAG1Q9UBP8 84 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 H7C2G1 150 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 I3L2K1 104 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 SCGB1C2P0DMR2 95 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 FOXI2Q6ZQN5 318 aa7.39□□□□□ -1.23
HLA-DOA-201ENST00000229829 M0R3E3 92 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 NDUFA3O95167 84 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 CT45A10P0DMU9 189 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 GFRALQ6UXV0 394 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 TTC9CQ8N5M4 171 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 TEX29Q8N6K0 151 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 Q8NA96 180 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 TRBV25-1A0A075B6N4 114 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 XGP55808 180 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 PLGLAQ15195 96 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 TWIST1Q15672 202 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 CT83Q5H943 113 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 RASL11BQ9BPW5 248 aa7.38□□□□□ -1.23
HLA-DOA-201ENST00000229829 TCTEX1D4Q5JR98 221 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 OTORQ9NRC9 128 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 PGPEP1Q9NXJ5 209 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 LY6HO94772 140 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 LEPP41159 167 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 CRIP1P50238 77 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 C1QTNF4Q9BXJ3 329 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 GAGE5Q13069 117 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 GAGE6Q13070 117 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 SRSF9Q13242 221 aaKnown RBP eCLIP7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 SCGB1D4Q6XE38 83 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 DEFB104AQ8WTQ1 72 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 RPEQ96AT9 228 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms