RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 Q6ZS46 218 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 Q6ZSR3 168 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 DTX2Q86UW9 622 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 SNRNP40Q96DI7 357 aaKnown RBP4.52□□□□□ -1.69
RFX4-201ENST00000229387 AKAP13Q12802 2813 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 USF3Q68DE3 2245 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 SVEP1Q4LDE5 3571 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 TRBV7-3A0A075B6L6 115 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 TRAV2A0A0B4J234 112 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 A0A0U1RRA0 63 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 PSPNO60542 156 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 IGHV3-13P01766 116 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 CD7P09564 240 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 COX7CP15954 63 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 CA6P23280 308 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 Q6ZPA2 131 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 CNEP1R1Q8N9A8 125 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 FAM168AQ92567 244 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 K7EM74 188 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 NPYP01303 97 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 CRYGSP22914 178 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 PSMB2P49721 201 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 C10orf128Q5T292 105 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 PDPNQ86YL7 162 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 PLEKHB2Q96CS7 222 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 FGF23Q9GZV9 251 aaPredicted RBP4.51□□□□□ -1.69
RFX4-201ENST00000229387 APC2O95996 2303 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 IGKV1D-13A0A0B4J2D9 117 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 LY6LH3BQJ8 138 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 EIF4EBP3O60516 100 aaPredicted RBP4.51□□□□□ -1.69
RFX4-201ENST00000229387 IGLV3-1P01715 115 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 IGKV1-13P0DP09 117 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 ZC2HC1BQ5TFG8 222 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 C20orf173Q96LM9 149 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 GFRA4Q9GZZ7 299 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 TP53TG1Q9Y2A0 90 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 PYGO1Q9Y3Y4 419 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 PKDREJQ9NTG1 2253 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 CUL9Q8IWT3 2517 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 TRAV8-4A0A0B4J246 113 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 HIGD1CA8MV81 97 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 TIMM23O14925 209 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 WT1P19544 449 aaPredicted RBP4.51□□□□□ -1.69
RFX4-201ENST00000229387 ZNF493Q6ZR52 646 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 GOLT1AQ6ZVE7 132 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 MKXQ8IYA7 352 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 ZNF414Q96IQ9 312 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 C9orf85Q96MD7 179 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 TMEM167BQ9NRX6 74 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 HHLA3Q9XRX5 114 aa4.51□□□□□ -1.69
RFX4-201ENST00000229387 LINC01548A6NM66 108 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 IGKV1-39P01597 117 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 IGKV1-5P01602 117 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 IGKV1D-39P04432 117 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 LGALS1P09382 135 aaKnown RBP4.5□□□□□ -1.69
RFX4-201ENST00000229387 Q6ZT83 130 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 LINC00336Q6ZUF6 198 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 APRG1Q8IVJ8 170 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 SLC25A39Q9BZJ4 359 aaPredicted RBP4.5□□□□□ -1.69
RFX4-201ENST00000229387 CSMD1Q96PZ7 3565 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 MUC6Q6W4X9 2439 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 A0A096LNJ9 63 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 OXTP01178 125 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 TRACP01848 142 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 FOXA3P55318 350 aaPredicted RBP4.5□□□□□ -1.69
RFX4-201ENST00000229387 CACNG7P62955 275 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 SPINK9Q5DT21 86 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 C1orf195Q5TG92 126 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 ZNF826PQ6ZT77 177 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 AMN1Q8IY45 258 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 MDS2Q8NDY4 140 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 TRGV9Q99603 122 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 FAM173AQ9BQD7 235 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 EPDR1Q9UM22 224 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 KLK5Q9Y337 293 aaPredicted RBP4.5□□□□□ -1.69
RFX4-201ENST00000229387 ADAMTS20P59510 1910 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 KALRNO60229 2985 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 TRAV8-1A0A0A6YYK1 113 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 C19orf71A6NCJ1 209 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 DEFA4P12838 97 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 LINC00205P59089 165 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
RFX4-201ENST00000229387 APOHP02749 345 aaPredicted RBP4.49□□□□□ -1.69
RFX4-201ENST00000229387 C19orf54Q5BKX5 351 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 SLC25A48Q6ZT89 311 aaKnown RBP4.49□□□□□ -1.69
RFX4-201ENST00000229387 PRIMA1Q86XR5 153 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 FDCSPQ8NFU4 85 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 ZNF503Q96F45 646 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 ZNF355PQ9NSJ1 428 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 SPRR3Q9UBC9 169 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 IGKV2D-26A0A0A0MRZ7 120 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 LGALS9O00182 355 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 DPM2O94777 84 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 PSMB8P28062 276 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 UBE2D1P51668 147 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 PAX8Q06710 450 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms