RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 CLPSL1A2RUU4 121 aa13.02□□□□□ -0.33
GAPDH-201ENST00000229239 HSBP1O75506 76 aa13.02□□□□□ -0.33
GAPDH-201ENST00000229239 CRIP1P50238 77 aa13.02□□□□□ -0.33
GAPDH-201ENST00000229239 LBHQ53QV2 105 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-201ENST00000229239 TEX43Q6ZNM6 134 aa13.02□□□□□ -0.33
GAPDH-201ENST00000229239 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.33
GAPDH-201ENST00000229239 RCHY1Q96PM5 261 aa13.02□□□□□ -0.33
GAPDH-201ENST00000229239 SMR3AQ99954 134 aa13.02□□□□□ -0.33
GAPDH-201ENST00000229239 PRO1933Q9H354 126 aa13.02□□□□□ -0.33
GAPDH-201ENST00000229239 U3KQE9 123 aa13.02□□□□□ -0.33
GAPDH-201ENST00000229239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.01□□□□□ -0.33
GAPDH-201ENST00000229239 SMAD7O15105 426 aaKnown RBP13.01□□□□□ -0.33
GAPDH-201ENST00000229239 LCN12Q6JVE5 192 aa13.01□□□□□ -0.33
GAPDH-201ENST00000229239 NSD1Q96L73 2696 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-201ENST00000229239 TMEM189A5PLL7 270 aa13□□□□□ -0.33
GAPDH-201ENST00000229239 J3QLI3 93 aa13□□□□□ -0.33
GAPDH-201ENST00000229239 PMCHP20382 165 aa13□□□□□ -0.33
GAPDH-201ENST00000229239 SSBP4Q9BWG4 385 aaPredicted RBP13□□□□□ -0.33
GAPDH-201ENST00000229239 LOC102724200A0A096LPH7 203 aaPredicted RBP12.99□□□□□ -0.33
GAPDH-201ENST00000229239 KIR2DL5BA0A0G2JN68 375 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 KIR2DL5BA0A0G2JPC4 375 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 H3BUX3 64 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 IGHG4P01861 327 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 TRGV3P03979 118 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 FAM209BQ5JX69 171 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 KIR2DL5AQ8N109 375 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 NDUFAF3Q9BU61 184 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 TLN2Q9Y4G6 2542 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
GAPDH-201ENST00000229239 IGHV3-35A0A0C4DH35 117 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
GAPDH-201ENST00000229239 C8orf49Q96NF6 230 aa12.99□□□□□ -0.33
GAPDH-201ENST00000229239 PPIFP30405 207 aaKnown RBP12.98□□□□□ -0.33
GAPDH-201ENST00000229239 LINC01356Q8N9X3 169 aa12.98□□□□□ -0.33
GAPDH-201ENST00000229239 C14orf144Q96I85 54 aa12.98□□□□□ -0.33
GAPDH-201ENST00000229239 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
GAPDH-201ENST00000229239 A0A0G2JLM5 398 aa12.97□□□□□ -0.33
GAPDH-201ENST00000229239 NDUFA4O00483 81 aa12.97□□□□□ -0.33
GAPDH-201ENST00000229239 SH2D1AO60880 128 aa12.97□□□□□ -0.33
GAPDH-201ENST00000229239 ZNF493Q6ZR52 646 aa12.97□□□□□ -0.33
GAPDH-201ENST00000229239 Q71RC1 249 aaPredicted RBP12.97□□□□□ -0.33
GAPDH-201ENST00000229239 RNF223E7ERA6 249 aa12.97□□□□□ -0.33
GAPDH-201ENST00000229239 ARL3P36405 182 aa12.97□□□□□ -0.33
GAPDH-201ENST00000229239 KRTDAPP60985 99 aa12.97□□□□□ -0.33
GAPDH-201ENST00000229239 PPP1R14DQ9NXH3 145 aa12.97□□□□□ -0.33
GAPDH-201ENST00000229239 CSPG4Q6UVK1 2322 aa12.96□□□□□ -0.33
GAPDH-201ENST00000229239 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.33
GAPDH-201ENST00000229239 LY6G6DO95868 133 aa12.96□□□□□ -0.33
GAPDH-201ENST00000229239 NIT1Q86X76 327 aa12.96□□□□□ -0.33
GAPDH-201ENST00000229239 VAMP8Q9BV40 100 aa12.96□□□□□ -0.33
GAPDH-201ENST00000229239 FABP5P3A8MUU1 101 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 M0R2Z0 102 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 OR5AL1P0C617 328 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 PMCHL1Q16048 86 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 LY6EQ16553 131 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 RNASEKQ6P5S7 137 aaKnown RBP12.95□□□□□ -0.34
GAPDH-201ENST00000229239 MRPL52Q86TS9 123 aaKnown RBP12.95□□□□□ -0.34
GAPDH-201ENST00000229239 ASCL2Q99929 193 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 ABCA2Q9BZC7 2435 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 ARMS2P0C7Q2 107 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 MAPK1IP1LQ8NDC0 245 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 VGLL1Q99990 258 aa12.95□□□□□ -0.34
GAPDH-201ENST00000229239 A0A096LNT2 108 aa12.94□□□□□ -0.34
GAPDH-201ENST00000229239 NTF3P20783 257 aa12.94□□□□□ -0.34
GAPDH-201ENST00000229239 C9orf139Q6ZV77 190 aa12.94□□□□□ -0.34
GAPDH-201ENST00000229239 FN1P02751 2386 aaKnown RBP12.93□□□□□ -0.34
GAPDH-201ENST00000229239 LINC00614P0C842 121 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 HLA-DMBP28068 263 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 CTRLP40313 264 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 LINC00527Q9UJ94 153 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 TMEM89A2RUT3 159 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 FAM181BA6NEQ2 426 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 IGLV1-40P01703 118 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 C3orf79P0CE67 100 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 HIST1H1AQ02539 215 aaPredicted RBP12.93□□□□□ -0.34
GAPDH-201ENST00000229239 C8orf86Q6ZUL3 223 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 GLMPQ8WWB7 406 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
GAPDH-201ENST00000229239 AVPP01185 164 aa12.92□□□□□ -0.34
GAPDH-201ENST00000229239 CD33P20138 364 aa12.92□□□□□ -0.34
GAPDH-201ENST00000229239 BTF3P20290 206 aaKnown RBP12.92□□□□□ -0.34
GAPDH-201ENST00000229239 LOXL1Q08397 574 aaPredicted RBP12.92□□□□□ -0.34
GAPDH-201ENST00000229239 TMEM78Q5T7P6 136 aa12.92□□□□□ -0.34
GAPDH-201ENST00000229239 C9orf47Q6ZRZ4 202 aa12.92□□□□□ -0.34
GAPDH-201ENST00000229239 FAM19A2Q8N3H0 131 aa12.92□□□□□ -0.34
GAPDH-201ENST00000229239 Q8N976 141 aa12.92□□□□□ -0.34
GAPDH-201ENST00000229239 TRAV8-2A0A0B4J237 113 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 LINC01559Q495D7 138 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 FER1L6-AS1Q8NA97 138 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 Q8TAT8 98 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 CR1P17927 2039 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 IGHV3-66A0A0C4DH42 116 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 C20orf202A1L168 122 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 ZNF138P52744 262 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 CFHR3Q02985 330 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 URB1-AS1Q96HZ7 61 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms