RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 IGLC7A0M8Q6 106 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 SMAD7O15105 426 aaKnown RBP10.94□□□□□ -0.66
NFKB1-201ENST00000226574 TNFRSF6BO95407 300 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 ETDBQ3ZM63 59 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 FAM104BQ5XKR9 115 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 AMTNQ6UX39 209 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 ABCA12Q86UK0 2595 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 ZNF503Q96F45 646 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 C7orf69Q9H7B7 122 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 SZT2Q5T011 3432 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 GATA4P43694 442 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 DDB2Q92466 427 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 IGHV3-73A0A0B4J1V6 119 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 NPC2P61916 151 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 OR9G4Q8NGQ1 327 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 DYNLRB2Q8TF09 96 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 GTSF1Q8WW33 167 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
NFKB1-201ENST00000226574 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 TMEM8BA6NDV4 472 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 EFNA4P52798 201 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 TNFRSF14Q92956 283 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 RNF114Q9Y508 228 aa10.93□□□□□ -0.66
NFKB1-201ENST00000226574 JMJD1CQ15652 2540 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 NDUFS7O75251 213 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 NEGR1Q7Z3B1 354 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 TRAV2A0A0B4J234 112 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 POU2AF1Q16633 256 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 IL17RELQ6ZVW7 336 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 TP53TG3Q9ULZ0 132 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 A0A087WWL8 130 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 PAX8Q06710 450 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 LAGE3Q14657 143 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 CHAC1Q9BUX1 264 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 LTBP2Q14767 1821 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 DOPEY1Q5JWR5 2465 aa10.92□□□□□ -0.66
NFKB1-201ENST00000226574 THBDP07204 575 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 ZNF688P0C7X2 276 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 P0C879 139 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 GRNP28799 593 aaKnown RBP10.91□□□□□ -0.66
NFKB1-201ENST00000226574 ANKRD39Q53RE8 183 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 C22orf34Q6ZV56 151 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 C11orf44Q8N8P7 122 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 DUX5Q96PT3 197 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-201ENST00000226574 GAGE1Q13065 139 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 GAGE13Q4V321 117 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 LINC00322Q6ZN03 302 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-201ENST00000226574 FN1P02751 2386 aaKnown RBP10.91□□□□□ -0.66
NFKB1-201ENST00000226574 SAP30O75446 220 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 PRR25Q96S07 402 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 NUP210LQ5VU65 1888 aa10.91□□□□□ -0.66
NFKB1-201ENST00000226574 NUP37Q8NFH4 326 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 SLC50A1Q9BRV3 221 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 GEMIN7Q9H840 131 aaKnown RBP10.9□□□□□ -0.66
NFKB1-201ENST00000226574 POLQO75417 2590 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 ZNF491Q8N8L2 437 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 SIGMAR1Q99720 223 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 ZNF747Q9BV97 191 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 LAMA1P25391 3075 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 IGHV4-39P01824 125 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 SIGLEC15Q6ZMC9 328 aa10.9□□□□□ -0.66
NFKB1-201ENST00000226574 FCN3O75636 299 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 IGKV1-17P01599 117 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 COX6CP09669 75 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 COX8AP10176 69 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 ADAMTSL5Q6ZMM2 481 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 SYT8Q8NBV8 401 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 ZNF492Q9P255 531 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 TRAV12-3A0A0B4J271 114 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 K7EP13 123 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 SEM1Q6ZVN7 128 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 MRPL52Q86TS9 123 aaKnown RBP10.89□□□□□ -0.67
NFKB1-201ENST00000226574 OR5A1Q8NGJ0 315 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 GDF5OSQ5U4N7 250 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 MRPL35Q9NZE8 188 aaKnown RBP10.89□□□□□ -0.67
NFKB1-201ENST00000226574 TRAV21A0A0B4J279 112 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 HAX1O00165 279 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 LHBP01229 141 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 NEU4Q8WWR8 484 aaPredicted RBP10.89□□□□□ -0.67
NFKB1-201ENST00000226574 MRAP2Q96G30 205 aa10.89□□□□□ -0.67
NFKB1-201ENST00000226574 TRAV8-2A0A0B4J237 113 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 SUMO2P61956 95 aaKnown RBP10.88□□□□□ -0.67
NFKB1-201ENST00000226574 EGR2P11161 476 aaPredicted RBP10.88□□□□□ -0.67
NFKB1-201ENST00000226574 SAA4P35542 130 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 ZNF562Q6V9R5 426 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 C1orf122Q6ZSJ8 110 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 RAX2Q96IS3 184 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 IGF2BP2-AS1Q96M15 143 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 GFRA4Q9GZZ7 299 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
NFKB1-201ENST00000226574 LINC00477Q96M19 166 aa10.88□□□□□ -0.67
NFKB1-201ENST00000226574 A0A1B0GV72 72 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 NPIPB6E9PJ23 425 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 ATP6V0E1O15342 81 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 PRTN3P24158 256 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms