RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 SEM1Q6ZVN7 128 aa8.5□□□□□ -1.05
VPS18-201ENST00000220509 KIR2DL4Q99706 377 aa8.5□□□□□ -1.05
VPS18-201ENST00000220509 SLC25A33Q9BSK2 321 aa8.5□□□□□ -1.05
VPS18-201ENST00000220509 COL5A1P20908 1838 aaPredicted RBP8.5□□□□□ -1.05
VPS18-201ENST00000220509 IGLV2-14P01704 120 aa8.5□□□□□ -1.05
VPS18-201ENST00000220509 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
VPS18-201ENST00000220509 PCSK5Q92824 1860 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 OR10J3Q5JRS4 329 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 LYRM7Q5U5X0 104 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 IGFL2Q6UWQ7 119 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 PRELID3AQ96N28 172 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 VGLL1Q99990 258 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 SMG1Q96Q15 3661 aaKnown RBP8.49□□□□□ -1.05
VPS18-201ENST00000220509 KLRD1Q13241 179 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 GAGE13Q4V321 117 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 PPP1R27Q86WC6 154 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 SRSF12Q8WXF0 261 aaKnown RBP8.49□□□□□ -1.05
VPS18-201ENST00000220509 C15orf65H3BRN8 121 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 ATP5LO75964 103 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 ORM1P02763 201 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 FAM106CPP0CH98 169 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 IGHV1-8P0DP01 117 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 UTF1Q5T230 341 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 Q6AWC8 147 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 GOLT1AQ6ZVE7 132 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 DUX3Q96PT4 197 aa8.49□□□□□ -1.05
VPS18-201ENST00000220509 FOXA2Q9Y261 457 aaPredicted RBP8.49□□□□□ -1.05
VPS18-201ENST00000220509 USP9XQ93008 2570 aaPredicted RBP8.48□□□□□ -1.05
VPS18-201ENST00000220509 IGHV3-49A0A0A0MS15 119 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 F8W1H4 67 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 TIMM23O14925 209 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 VWC2Q2TAL6 325 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 TMEM78Q5T7P6 136 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 LRRC75A-AS1Q8N1F1 130 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 KALRNO60229 2985 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 S100A4P26447 101 aaKnown RBP8.48□□□□□ -1.05
VPS18-201ENST00000220509 SP5Q6BEB4 398 aaPredicted RBP8.48□□□□□ -1.05
VPS18-201ENST00000220509 SLC25A48Q6ZT89 311 aaKnown RBP8.48□□□□□ -1.05
VPS18-201ENST00000220509 NUP37Q8NFH4 326 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 ZNF462Q96JM2 2506 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 LY6EQ16553 131 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 C17orf58Q2M2W7 97 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 C22orf34Q6ZV56 151 aa8.48□□□□□ -1.05
VPS18-201ENST00000220509 TMEM213A2RRL7 107 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 H3BMG7 143 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 MSMPQ1L6U9 139 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 MRPL32Q9BYC8 188 aaKnown RBP8.47□□□□□ -1.05
VPS18-201ENST00000220509 ABCA12Q86UK0 2595 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 IGLV3-9A0A075B6K5 115 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 TMEM8BA6NDV4 472 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 NUP35Q8NFH5 326 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 BAALCQ8WXS3 180 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 TANC2Q9HCD6 1990 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 A0A0U1RRA0 63 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 A8MWL6 223 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 H0YJW9 148 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 FAM106AQ4KMX7 169 aa8.47□□□□□ -1.05
VPS18-201ENST00000220509 ARHGAP32A7KAX9 2087 aa8.46□□□□□ -1.05
VPS18-201ENST00000220509 FAM90A9PA6NNJ1 464 aa8.46□□□□□ -1.05
VPS18-201ENST00000220509 GGTLC3B5MD39 225 aa8.46□□□□□ -1.05
VPS18-201ENST00000220509 GRNP28799 593 aaKnown RBP8.46□□□□□ -1.05
VPS18-201ENST00000220509 KLF17Q5JT82 389 aaPredicted RBP8.46□□□□□ -1.05
VPS18-201ENST00000220509 PMS2P5A8MQ11 134 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 VWC2LB2RUY7 222 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 NHLRC4P0CG21 123 aaPredicted RBP8.46□□□□□ -1.06
VPS18-201ENST00000220509 GCSHP23434 173 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 DIAPH2-AS1Q14236 149 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 NAV3Q8IVL0 2385 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 NAV2Q8IVL1 2488 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 A0A1W2PPI3 338 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 Q8TCH9 128 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 SIGLEC9Q9Y336 463 aa8.46□□□□□ -1.06
VPS18-201ENST00000220509 FASNP49327 2511 aaKnown RBP8.46□□□□□ -1.06
VPS18-201ENST00000220509 IGHV3-66A0A0C4DH42 116 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 NPFFO15130 113 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 HLA-DRB1P01911 266 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 AMTNQ6UX39 209 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 PEX7O00628 323 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 TEX45Q8NA69 505 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 MYO9AB2RTY4 2548 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 TRAV9-1A0A075B6T8 112 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 A1L4Q6 167 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
VPS18-201ENST00000220509 SYS1-DBNDD2H3BUS1 97 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 LOXL3P58215 753 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 C9orf153Q5TBE3 101 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 CDIP1Q9H305 208 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 NBR2O15453 112 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 THBDP07204 575 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 Q8NA96 180 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 C18orf15Q96N68 181 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 RETNQ9HD89 108 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 IGHV1-3A0A0C4DH29 117 aa8.44□□□□□ -1.06
VPS18-201ENST00000220509 TCRBV4S1A1TA0A5B7 111 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms