RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ZNF726P1Q15940 193 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 hADV29S1A0JD25 119 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 HAMPP81172 84 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 TMEM190Q8WZ59 177 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 ZNF581Q9P0T4 197 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 PVRIGQ6DKI7 326 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 TMEM133Q9H2Q1 129 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 IGHV1-45A0A0A0MS14 117 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 NDUFV3P56181 108 aaKnown RBP9.05□□□□□ -0.96
USP31-201ENST00000219689 RNF144BQ7Z419 303 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 LINC00527Q9UJ94 153 aa9.05□□□□□ -0.96
USP31-201ENST00000219689 NDUFS7O75251 213 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 EPG5Q9HCE0 2579 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 IL17RELQ6ZVW7 336 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 PRR7Q8TB68 274 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 IGHV3OR16-10A0A075B7F0 116 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 ATOX1O00244 68 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 IGKV1-27A0A075B6S5 117 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 IGLL5B9A064 214 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 IGHG2P01859 326 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 CCL4P13236 92 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 YPEL3P61236 119 aaPredicted RBP9.04□□□□□ -0.96
USP31-201ENST00000219689 QRFPP83859 136 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 RASL10AQ92737 203 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 SSC4DQ8WTU2 575 aa9.04□□□□□ -0.96
USP31-201ENST00000219689 ERCC8Q13216 396 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 TFF2Q03403 129 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 SLC22A18ASQ8N1D0 253 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 TRAV26-2A0A0B4J265 109 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 MRPL35Q9NZE8 188 aaKnown RBP9.03□□□□□ -0.96
USP31-201ENST00000219689 A0A087WWL8 130 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 FOXI1Q12951 378 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 Q86TA4 180 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 HAX1O00165 279 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 PRIMA1Q86XR5 153 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 DSCR8Q96T75 97 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
USP31-201ENST00000219689 IGHV1OR15-9A0A0B4J2B8 117 aa9.02□□□□□ -0.96
USP31-201ENST00000219689 PRR33A8MZF0 331 aa9.02□□□□□ -0.96
USP31-201ENST00000219689 K7EN84 100 aa9.02□□□□□ -0.96
USP31-201ENST00000219689 NPYP01303 97 aa9.02□□□□□ -0.96
USP31-201ENST00000219689 SIGLEC15Q6ZMC9 328 aa9.02□□□□□ -0.96
USP31-201ENST00000219689 U3KQE9 123 aa9.02□□□□□ -0.96
USP31-201ENST00000219689 A0A0G2JRQ6 117 aa9.02□□□□□ -0.97
USP31-201ENST00000219689 SRSF7Q16629 238 aaKnown RBP eCLIP9.02□□□□□ -0.976e-6■□□□□ 11.2
USP31-201ENST00000219689 TRGV9Q99603 122 aa9.02□□□□□ -0.97
USP31-201ENST00000219689 ANAPC10Q9UM13 185 aa9.02□□□□□ -0.97
USP31-201ENST00000219689 KLF5Q13887 457 aaPredicted RBP9.02□□□□□ -0.97
USP31-201ENST00000219689 TAL2Q16559 108 aa9.02□□□□□ -0.97
USP31-201ENST00000219689 Q6ZUT4 128 aa9.02□□□□□ -0.97
USP31-201ENST00000219689 TRGV11A0A075B6L2 103 aa9.02□□□□□ -0.97
USP31-201ENST00000219689 CENPEQ02224 2701 aa9.02□□□□□ -0.97
USP31-201ENST00000219689 C1orf159Q96HA4 380 aa9.02□□□□□ -0.97
USP31-201ENST00000219689 SRRM4A7MD48 611 aaKnown RBP9.01□□□□□ -0.97
USP31-201ENST00000219689 MYOD1P15172 320 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 IGKV1-12A0A0C4DH73 117 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 IGKV1D-12P01611 117 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 ZNF876PQ49A33 203 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 LINC00173Q6ZV60 143 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 TP53TG1Q9Y2A0 90 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 SPAARA0A1B0GVQ0 90 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 TM4SF4P48230 202 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 LINC00205P59089 165 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 IGFL4Q6B9Z1 124 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 C16orf54Q6UWD8 224 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 IFI6P09912 130 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 RBX1P62877 108 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 Q6ZRM9 215 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 NBR2O15453 112 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 BAALC-AS2P0C853 105 aa9.01□□□□□ -0.97
USP31-201ENST00000219689 HTN3P15516 51 aa9□□□□□ -0.97
USP31-201ENST00000219689 A0A1W2PPI3 338 aa9□□□□□ -0.97
USP31-201ENST00000219689 FAM166AQ6J272 317 aa9□□□□□ -0.97
USP31-201ENST00000219689 M0R1W7 72 aa9□□□□□ -0.97
USP31-201ENST00000219689 TEN1Q86WV5 123 aa9□□□□□ -0.97
USP31-201ENST00000219689 NDPQ00604 133 aa9□□□□□ -0.97
USP31-201ENST00000219689 FAM216BQ8N7L0 139 aa9□□□□□ -0.97
USP31-201ENST00000219689 TRAV12-2A0A075B6T6 113 aa9□□□□□ -0.97
USP31-201ENST00000219689 IGHG3P01860 377 aa9□□□□□ -0.97
USP31-201ENST00000219689 CCL21O00585 134 aa9□□□□□ -0.97
USP31-201ENST00000219689 FAM104BQ5XKR9 115 aa9□□□□□ -0.97
USP31-201ENST00000219689 LINC00312Q9Y6C7 94 aa9□□□□□ -0.97
USP31-201ENST00000219689 TGFBR3LH3BV60 316 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 SPACA3Q8IXA5 215 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 Q8N8P6 123 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 TRGV4A0A0C4DH28 118 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 MPLKIPQ8TAP9 179 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 CLPSL1A2RUU4 121 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 CXCL10P02778 98 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 TIMM23O14925 209 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 TRPT1Q86TN4 253 aaKnown RBP8.99□□□□□ -0.97
USP31-201ENST00000219689 PEMTQ9UBM1 199 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 J3QW42 95 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 FXYD2P54710 66 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 FOXG1P55316 489 aaPredicted RBP8.99□□□□□ -0.97
USP31-201ENST00000219689 TMEM75Q8N9X5 138 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 CRLF1O75462 422 aa8.99□□□□□ -0.97
USP31-201ENST00000219689 A0A0B4J2C4 111 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms